RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CDK3Q00526 305 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 DCST1Q5T197 706 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 C19orf48Q6RUI8 117 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 LAX1Q8IWV1 398 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 HDDC3Q8N4P3 179 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 RAD51AP1Q96B01 352 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 ZG16BQ96DA0 208 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 PLA2G12AQ9BZM1 189 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 POLR2J3Q9H1A7 115 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC6A17Q9H1V8 727 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 A4GNTQ9UNA3 340 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 GPR52Q9Y2T5 361 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 HEATR5BQ9P2D3 2071 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 EFCAB10A6NFE3 127 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 A6NL46 340 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 TAF4O00268 1085 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 VEGFDO43915 354 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 H1F0P07305 194 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 SF3B4Q15427 424 aaKnown RBP eCLIP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF181Q2M3W8 571 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 FAM46CQ5VWP2 391 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 AMZ2Q86W34 360 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 MINDY2Q8NBR6 621 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 C16orf58Q96GQ5 468 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 COX14Q96I36 57 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 TSSK6Q9BXA6 273 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 SEC14L3Q9UDX4 400 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 TBC1D24Q9ULP9 559 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 GPR34Q9UPC5 381 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 ICKQ9UPZ9 632 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 HTR3EA5X5Y0 456 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 PGRMC2O15173 223 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 PAK4O96013 591 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MMP11P24347 488 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MAGEA8P43361 318 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MAPK9P45984 424 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 KCNJ5P48544 419 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MLLT1Q03111 559 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 PRKCDQ05655 676 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 FUT5Q11128 374 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 CDC20Q12834 499 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 FBXO43Q4G163 708 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 ZER1Q7Z7L7 766 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 CCDC190Q86UF4 302 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 OR8H2Q8N162 312 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 OR6T1Q8NGN1 323 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 DOK4Q8TEW6 326 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 OR5P2Q8WZ92 322 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 RAB7BQ96AH8 199 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 DPH7Q9BTV6 452 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 OSGEPL1Q9H4B0 414 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 EGLN3Q9H6Z9 239 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 A4GALTQ9NPC4 353 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 TMCC3Q9ULS5 477 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 KLK4Q9Y5K2 254 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 SPEGQ15772 3267 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 ERAL1O75616 437 aaKnown RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 KELP23276 732 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 CRYBB2P43320 205 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 TAB1Q15750 504 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 BAK1Q16611 211 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 ITPRIPL2Q3MIP1 535 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 KIAA1211LQ6NV74 962 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 TMEM53Q6P2H8 277 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 IQCHQ86VS3 1027 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 ZFP41Q8N8Y5 198 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 SYT14Q8NB59 555 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MTERF3Q96E29 417 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 CRELD1Q96HD1 420 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 LMAN2LQ9H0V9 348 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 DPEP2Q9H4A9 486 aa12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
GTF2F1-201ENST00000394456 MYO15AQ9UKN7 3530 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 C17orf113A0A1B0GUU1 675 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 NDUFS4O43181 175 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 FHP07954 510 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CHRM4P08173 479 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 LAMP2P13473 410 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 HOXD12P35452 270 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms