RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PPP1R8Q12972 351 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 MED21Q13503 144 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 MYBPC3Q14896 1274 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CYP27C1Q4G0S4 372 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 GPAT3Q53EU6 434 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CRB2Q5IJ48 1285 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 C6orf52Q5T4I8 152 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PRAMEF17Q5VTA0 474 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 WDR53Q7Z5U6 358 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 STK32CQ86UX6 486 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 KMT5CQ86Y97 462 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR51Q1Q8NH59 317 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 IFI44Q8TCB0 444 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 MAGEE2Q8TD90 523 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 ANKRD9Q96BM1 317 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 SLC41A2Q96JW4 573 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR7D2Q96RA2 312 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF607Q96SK3 696 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 NDC1Q9BTX1 674 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ACTRT3Q9BYD9 372 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 LRRN3Q9H3W5 708 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 RUBCNLQ9H714 662 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PRTFDC1Q9NRG1 225 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 RAB26Q9ULW5 256 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ABCG2Q9UNQ0 655 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 AP4B1Q9Y6B7 739 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 U3KQV3 271 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TTC28Q96AY4 2481 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 A0A1W2PQM1 296 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 C7orf72A4D263 438 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 EI24O14681 340 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 ACOX3O15254 700 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PDE9AO76083 593 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 RASAL1O95294 804 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 BMP10O95393 424 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PGM3O95394 542 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TNFRSF1BP20333 461 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 XCR1P46094 333 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR1D4P47884 311 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR1E2P47887 323 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 KCNJ10P78508 379 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 VLDLRP98155 873 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ELOAQ14241 798 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 GNA13Q14344 377 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 INAVAQ3KP66 663 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 IFI44LQ53G44 452 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TRMT12Q53H54 448 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF628Q5EBL2 1059 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ATAD3BQ5T9A4 648 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR2T5Q6IEZ7 315 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TCEAL6Q6IPX3 200 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TLDC1Q6P9B6 456 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TBPL2Q6SJ96 375 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 OLIG3Q7RTU3 272 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TMPRSS9Q7Z410 1059 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF595Q8IYB9 648 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PACRGLQ8N7B6 248 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 RCBTB1Q8NDN9 531 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 OR2T29Q8NH02 315 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ADAMTS15Q8TE58 950 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ADAMTS18Q8TE60 1221 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 SLC9A6Q92581 669 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 TCEAL3Q969E4 200 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 RNF31Q96EP0 1072 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 MS4A4EQ96PG1 132 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 DPYSL5Q9BPU6 564 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 ZNF768Q9H5H4 540 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 ADAP2Q9NPF8 381 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 FGF21Q9NSA1 209 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 PTGFRNQ9P2B2 879 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 DHCR7Q9UBM7 475 aaKnown RBP8.1□□□□□ -1.11
TDP1-203ENST00000393454 KCNE3Q9Y6H6 103 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 R4GN57 208 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 CCDC88CQ9P219 2028 aa8.1□□□□□ -1.11
TDP1-203ENST00000393454 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 PRAMEF27A3QJZ7 478 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 BLACEA4D250 179 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 OR2W5A6NFC9 320 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 EIF4E1BA6NMX2 242 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 H0YIG0 161 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 H0YJX3 145 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 PLOD2O00469 737 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZNF749O43361 778 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 CTNSO60931 367 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SEMG1P04279 462 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ATP1B1P05026 303 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SLC35E2P0CK97 266 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAGEA2P43356 314 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAGEA8P43361 318 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 CRISP3P54108 245 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 EMP3P54852 163 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 BTG2P78543 158 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAPK11Q15759 364 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms