RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TSNAXQ99598 290 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 VNN3Q9NY84 501 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 CNOT2Q9NZN8 540 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 H7C0S8 307 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 PRAMEF12O95522 483 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 GJA5P36382 358 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 SIGIRRQ6IA17 410 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 GPR26Q8NDV2 337 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.57□□□□□ -0.248e-7■■■■□ 24.3
RTF1-201ENST00000389629 TSEN15Q8WW01 171 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 RELTQ969Z4 430 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TMEM19Q96HH6 336 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 CCDC3Q9BQI4 270 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 ZNF471Q9BX82 626 aaPredicted RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 PPA2Q9H2U2 334 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 A3GALT2U3KPV4 340 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 ANHXE9PGG2 379 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 INPPL1O15357 1258 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 ARHGEF15O94989 841 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 ETV3P41162 512 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 MC1RQ01726 317 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 GPR68Q15743 365 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
RTF1-201ENST00000389629 SLC5A11Q8WWX8 675 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TMEM27Q9HBJ8 222 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 C5AR2Q9P296 337 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 NDRG4Q9ULP0 352 aaKnown RBP13.57□□□□□ -0.24
RTF1-201ENST00000389629 EDARQ9UNE0 448 aa13.57□□□□□ -0.24
RTF1-201ENST00000389629 MT-ND5P03915 603 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 HLA-EP13747 358 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 JUNDP17535 347 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CCR7P32248 378 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 ODF4Q2M2E3 257 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SLC30A6Q6NXT4 461 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SERPINA13PQ6UXR4 307 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 ZNF551Q7Z340 670 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 MTG2Q9H4K7 406 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 RLIMQ9NVW2 624 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 M0R3H8 397 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SCAMP1O15126 338 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SERPINA3P01011 423 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 MPC1LP0DKB6 136 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 UQCRC2P22695 453 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 ACVR1Q04771 509 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SWI5Q1ZZU3 235 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CRTC1Q6UUV9 634 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CFAP77Q6ZQR2 320 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 IL17RDQ8NFM7 739 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 PIGUQ9H490 435 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 MUTYHQ9UIF7 546 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CACNG2Q9Y698 323 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 A0A1W2PRU2 124 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 GASTP01350 101 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 IL1AP01583 271 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 PKLRP30613 574 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 MLLT3P42568 568 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 CTBP2P56545 445 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 KCNC3Q14003 757 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 BAK1Q16611 211 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 ZNF362Q5T0B9 420 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 COMMD6Q7Z4G1 85 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 NUDT13Q86X67 352 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SYT14Q8NB59 555 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 ZNF225Q9UK10 706 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SLC45A1Q9Y2W3 748 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 OR6C74A6NCV1 312 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 GPX5O75715 221 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SLC16A8O95907 504 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 TFP02787 698 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 IFNA6P05013 189 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 OR8S1Q8NH09 359 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 SUSD6Q92537 303 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 BHLHE41Q9C0J9 482 aaPredicted RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 RDH14Q9HBH5 336 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 TXNL4BQ9NX01 149 aaKnown RBP13.56□□□□□ -0.24
RTF1-201ENST00000389629 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
RTF1-201ENST00000389629 HSD3B1P14060 373 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 HSD3B2P26439 372 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 FKBP1BP68106 108 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 LMAN2Q12907 356 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 FAM122CQ6P4D5 195 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
RTF1-201ENST00000389629 PDZD9Q8IXQ8 264 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms