RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 FAM214AQ32MH5 1076 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 HEPHL1Q6MZM0 1159 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 TMEM107Q6UX40 140 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 ZNF605Q86T29 641 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 ZNF761Q86XN6 746 aaPredicted RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 ZNF595Q8IYB9 648 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 TTC29Q8NA56 475 aaPredicted RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 TSPAN14Q8NG11 270 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 OR10Q1Q8NGQ4 319 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 OR9A2Q8NGT5 310 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 ADAMTS15Q8TE58 950 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 GIPC3Q8TF64 312 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 APOBEC4Q8WW27 367 aaKnown RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 MVB12AQ96EY5 273 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 GIMAP5Q96F15 307 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 AHCYL2Q96HN2 611 aaKnown RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 SERHL2Q9H4I8 314 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 SMURF2Q9HAU4 748 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 WASHC1A8K0Z3 465 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 CLDN4O14493 209 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 DUX1O43812 170 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 PRAMEF10O60809 474 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 OXSR1O95747 527 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 RNH1P13489 461 aaKnown RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 GALNSP34059 522 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 HOXD12P35452 270 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 MC3RP41968 323 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 AVPR1BP47901 424 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 PRKAG1P54619 331 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 CASP9P55211 416 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 KCNAB2Q13303 367 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 GPR19Q15760 415 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 MICAQ29983 383 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 YOD1Q5VVQ6 348 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 WDR74Q6RFH5 385 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 TSEN54Q7Z6J9 526 aaKnown RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 RABEPKQ7Z6M1 372 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 TSPYL5Q86VY4 417 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 RAB8BQ92930 207 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 OR7D2Q96RA2 312 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 STACQ99469 402 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 PINK1Q9BXM7 581 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 KLHL25Q9H0H3 589 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 NLGN3Q9NZ94 848 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 MUTYHQ9UIF7 546 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 SLC9A8Q9Y2E8 581 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 SH3GLB1Q9Y371 365 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 MAGED1Q9Y5V3 778 aaPredicted RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 U3KQV3 271 aa12.74□□□□□ -0.37
SEC13-203ENST00000383801 GOLGA4Q13439 2230 aaKnown RBP12.74□□□□□ -0.37
SEC13-203ENST00000383801 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 HYKKA2RU49 373 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 SYNDIG1LA6NDD5 238 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 TTC36A6NLP5 189 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CTNSO60931 367 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 OPN1SWP03999 348 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 GNAO1P09471 354 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 ALPPL2P10696 532 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 TDGF1P13385 188 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CNR2P34972 360 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 MLLT3P42568 568 aaPredicted RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 LIMS1P48059 325 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 DAPP51397 102 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CXCR4P61073 352 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 PPP1CAP62136 330 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 RPS26P62854 115 aaKnown RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 CSNK2BP67870 215 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 DUSP2Q05923 314 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 GRM7Q14831 915 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 SYPL1Q16563 259 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 ZNF628Q5EBL2 1059 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 BORAQ6PGQ7 559 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CEP68Q76N32 757 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 SZRD1Q7Z422 152 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 OR4C15Q8NGM1 316 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms