RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ITIH1P19827 911 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CD22P20273 847 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PSMB9P28065 219 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 AQP1P29972 269 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CD6P30203 668 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 KDELR2P33947 212 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RYKP34925 604 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 IDUAP35475 653 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CBSP35520 551 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SLC6A12P48065 614 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GSSP48637 474 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CSNK1DP48730 415 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SPINT3P49223 89 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 WNT3P56703 355 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PFN3P60673 137 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 VBP1P61758 197 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SNRPD1P62314 119 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 MRPS21P82921 87 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 VLDLRP98155 873 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MC2RQ01718 297 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 NOGQ13253 232 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DGCR6Q14129 220 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CTF1Q16619 201 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ADPRMQ3LIE5 342 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CCSMST1Q4G0I0 132 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MPPE1Q53F39 396 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 XKR6Q5GH73 641 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZNF362Q5T0B9 420 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 FRG2Q64ET8 278 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TPGS2Q68CL5 300 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 OR2T5Q6IEZ7 315 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ADNP2Q6IQ32 1131 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 Q6ZPB1 254 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 DPY19L3Q6ZPD9 716 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RNF165Q6ZSG1 346 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TPRG1Q6ZUI0 275 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LRRC70Q7Z2Q7 622 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 HORMAD1Q86X24 394 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PTOV1Q86YD1 416 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ANKRD13BQ86YJ7 626 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TCEAL8Q8IYN2 117 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RNF168Q8IYW5 571 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 CMTM8Q8IZV2 173 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CHCHD4Q8N4Q1 142 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LMNTD1Q8N9Z9 388 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 L3MBTL4Q8NA19 623 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TTC29Q8NA56 475 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 ATG16L2Q8NAA4 619 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 FAM98AQ8NCA5 519 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZNF540Q8NDQ6 660 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 OR2AP1Q8NGE2 309 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 OR52E4Q8NGH9 312 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 OR2T29Q8NH02 315 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SVIPQ8NHG7 77 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 POC1BQ8TC44 478 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZFP90Q8TF47 636 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TRUB1Q8WWH5 349 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 ELMO1Q92556 727 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RORBQ92753 470 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MAL2Q969L2 176 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SH3KBP1Q96B97 665 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SCRN2Q96FV2 425 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MED8Q96G25 268 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SH3YL1Q96HL8 342 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 LRIG1Q96JA1 1093 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MAGED4Q96JG8 741 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 FRG2BQ96QU4 278 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MTERF1Q99551 399 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 VKORC1Q9BQB6 163 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LRFN3Q9BTN0 628 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CNPPD1Q9BV87 410 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SPATA5L1Q9BVQ7 753 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 GPR35Q9HC97 309 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TM9SF3Q9HD45 589 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SLAMF7Q9NQ25 335 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PRDM8Q9NQV8 689 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MRPL17Q9NRX2 175 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 RASSF1Q9NS23 344 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SEMA4GQ9NTN9 838 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DNAJC11Q9NVH1 559 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CHCHD3Q9NX63 227 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 SELENONQ9NZV5 590 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PDP1Q9P0J1 537 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 KIF17Q9P2E2 1029 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SLCO3A1Q9UIG8 710 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ENPP5Q9UJA9 477 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LSM7Q9UK45 103 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 BLOC1S6Q9UL45 172 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SAMD4AQ9UPU9 718 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 BTBD3Q9Y2F9 522 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 AP3M1Q9Y2T2 418 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TMEM202A6NGA9 273 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 OR2AG2A6NM03 316 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GABRR3A8MPY1 467 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 MAGEB17A8MXT2 336 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 E7EQ34 232 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GFYI3L273 518 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 M0R3G1 203 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 CBFA2T3O75081 653 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms