RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 H0YGG7 62 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 B3GALT2O43825 422 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 SEMA7AO75326 666 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 NR2F1P10589 423 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 CTSEP14091 401 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 ALOX12P18054 663 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 ARF3P61204 181 aaPredicted RBP18.1■□□□□ 0.49
GMDS-201ENST00000380805 SLC35A2P78381 396 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 IL1RL1Q01638 556 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 ZNF542PQ5EBM4 170 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 DGLUCYQ7Z3D6 616 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 OOSP2Q86WS3 158 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 SLC44A2Q8IWA5 706 aaPredicted RBP18.1■□□□□ 0.49
GMDS-201ENST00000380805 SFTPA2Q8IWL1 248 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 ZNF655Q8N720 491 aaPredicted RBP18.1■□□□□ 0.49
GMDS-201ENST00000380805 FRMD1Q8N878 549 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 OR9A2Q8NGT5 310 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 XAGE5Q8WWM1 108 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 GIMAP5Q96F15 307 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 COL21A1Q96P44 957 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 RLIMQ9NVW2 624 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 SEC14L3Q9UDX4 400 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 ENOPH1Q9UHY7 261 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 MRPS17Q9Y2R5 130 aaKnown RBP18.1■□□□□ 0.49
GMDS-201ENST00000380805 PCDHGA6Q9Y5G7 932 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 SLC22A7Q9Y694 548 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 DSPPQ9NZW4 1301 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 TTC28Q96AY4 2481 aa18.1■□□□□ 0.49
GMDS-201ENST00000380805 LOC105369274A0A096LPK9 316 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 LOC102723532A0A0G2JNH3 316 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 A0A0G2JPF8 293 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 A0A1W2PR77 199 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 HNRNPCL2B2RXH8 293 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 HNRNPCL3B7ZW38 293 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CCNB2O95067 398 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CHRM4P08173 479 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 IFI6P09912 130 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 C8orf89P0DMQ9 161 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 HNRNPCL4P0DMR1 293 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 ITIH1P19827 911 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CPN2P22792 545 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CD27P26842 260 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 PCSK6P29122 969 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 GGT2P36268 569 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 MC3RP41968 323 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 HHEXQ03014 270 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 RUNX2Q13950 521 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 LASP1Q14847 261 aaKnown RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 LAIR1Q6GTX8 287 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 USP53Q70EK8 1073 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 IQCHQ86VS3 1027 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CLVS1Q8IUQ0 354 aaPredicted RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 UBALD2Q8IYN6 164 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 OR4N4Q8N0Y3 316 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 LRRC25Q8N386 305 aaPredicted RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 AVL9Q8NBF6 648 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 ZDHHC1Q8WTX9 485 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 PHF10Q8WUB8 498 aaKnown RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 SGCDQ92629 289 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 RERGQ96A58 199 aaPredicted RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 SCN3AQ9NY46 2000 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 TRPC4Q9UBN4 977 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 WNT16Q9UBV4 365 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 POMT2Q9UKY4 750 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 TPRKBQ9Y3C4 175 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 METTL12A8MUP2 240 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 PCDH17O14917 1159 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CASC3O15234 703 aaKnown RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 TRMUO75648 421 aaKnown RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 PCMT1P22061 227 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CSNK2BP67870 215 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 ZXDAP98168 799 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 NEDD8Q15843 81 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 DEFB134Q4QY38 66 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.09■□□□□ 0.49
GMDS-201ENST00000380805 MLIPQ5VWP3 458 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 SZRD1Q7Z422 152 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 NUP43Q8NFH3 380 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 OR52J3Q8NH60 311 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 MPP4Q96JB8 637 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 ALPK1Q96QP1 1244 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 NODALQ96S42 347 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 NIPSNAP1Q9BPW8 284 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 FUZQ9BT04 418 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 UCK1Q9HA47 277 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 FANCEQ9HB96 536 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 FBXL21Q9UKT6 434 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 LIPT1Q9Y234 373 aa18.09■□□□□ 0.49
GMDS-201ENST00000380805 WBP4O75554 376 aaKnown RBP18.08■□□□□ 0.48
GMDS-201ENST00000380805 OXSR1O95747 527 aaPredicted RBP18.08■□□□□ 0.48
GMDS-201ENST00000380805 CSF2P04141 144 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 ALPPL2P10696 532 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 PVRP15151 417 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 TLX1P31314 330 aaPredicted RBP18.08■□□□□ 0.48
GMDS-201ENST00000380805 STARD6P59095 220 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 CWF19L1Q69YN2 538 aaKnown RBP18.08■□□□□ 0.48
GMDS-201ENST00000380805 ENTHD1Q8IYW4 607 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 SIX5Q8N196 739 aa18.08■□□□□ 0.48
GMDS-201ENST00000380805 FAM160A2Q8N612 972 aaPredicted RBP18.08■□□□□ 0.48
GMDS-201ENST00000380805 BPIFB6Q8NFQ5 453 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms