RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TUBA3CQ13748 450 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF267Q14586 743 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 OR1C1Q15619 314 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF750Q32MQ0 723 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SLC48A1Q6P1K1 146 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 GALNT18Q6P9A2 607 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 TUBA3EQ6PEY2 450 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 C16orf47Q6ZP98 133 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF721Q8TF20 911 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 TWIST2Q8WVJ9 160 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 RIT1Q92963 219 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 C19orf60Q96EN9 201 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SENP5Q96HI0 755 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ART5Q96L15 291 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 C5orf34Q96MH7 638 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 CITED4Q96RK1 184 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 TUBB1Q9H4B7 451 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 LIN28AQ9H9Z2 209 aaKnown RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 NKIRAS1Q9NYS0 192 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 HEY2Q9UBP5 337 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 UTS2RQ9UKP6 389 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 PSME2Q9UL46 239 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ERVK-19Q9WJR5 959 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 DNAJC15Q9Y5T4 150 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 COPG1Q9Y678 874 aaKnown RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF780BQ9Y6R6 833 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SCN2AQ99250 2005 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 PDZD2O15018 2839 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM114B3SHH9 223 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 HRKO00198 91 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 WWP2O00308 870 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 PIP5K1BO14986 540 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ITM2AO43736 263 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ITGA10O75578 1167 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 DRD2P14416 443 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 PORP16435 677 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 CSNK2A2P19784 350 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GNLYP22749 145 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GRK2P25098 689 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 PTGER1P34995 402 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ABCE1P61221 599 aaKnown RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 RPL38P63173 70 aaKnown RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 RNF4P78317 190 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF763Q0D2J5 394 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 C2orf80Q0P641 193 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 STX3Q13277 289 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 HEPACAMQ14CZ8 416 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 SPRED3Q2MJR0 410 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GALNTL6Q49A17 601 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF766Q5HY98 468 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 AGBL2Q5U5Z8 902 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF468Q5VIY5 522 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 CES4AQ5XG92 561 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 SPINK14Q6IE38 97 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 NOXRED1Q6NXP6 359 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 FAM180BQ6P0A1 224 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 RNF111Q6ZNA4 994 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 HDXQ7Z353 690 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM156Q8N614 296 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 HORMAD2Q8N7B1 307 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 OR5L2Q8NGL0 311 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 OR2T11Q8NH01 316 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 FAM76AQ8TAV0 307 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 EXOSC8Q96B26 276 aaKnown RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ARL8AQ96BM9 186 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 TLCD1Q96CP7 247 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 SNRNP40Q96DI7 357 aaKnown RBP8.57□□□□□ -1.04
HMGN1-202ENST00000380747 FBXL20Q96IG2 436 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 SIGLEC12Q96PQ1 595 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GAL3ST4Q96RP7 486 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 BRINP2Q9C0B6 783 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 CXorf21Q9HAI6 301 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 MIEF1Q9NQG6 463 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 KLHL1Q9NR64 748 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GIMAP4Q9NUV9 329 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ASF1BQ9NVP2 202 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 C1orf109Q9NX04 203 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 LRFN1Q9P244 771 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 GIMAP2Q9UG22 337 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 ZDHHC2Q9UIJ5 367 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 CES1P1Q9UKY3 287 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 CCL27Q9Y4X3 112 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 TACC2O95359 2948 aa8.57□□□□□ -1.04
HMGN1-202ENST00000380747 NF1P21359 2839 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 WIPF3A6NGB9 483 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 LCE2BO14633 110 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 PEX11AO75192 247 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SEMA7AO75326 666 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 OR2J2O76002 312 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 IGKV3-11P04433 115 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 THBS1P07996 1170 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 CT62P0C5K7 136 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 H2AFXP16104 143 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 PCSK2P16519 638 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 PRPH2P23942 346 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SSTR4P31391 388 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms