RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 KCNE3Q9Y6H6 103 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 C18orf63Q68DL7 685 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 PAQR6Q6TCH4 344 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 CASP12Q6UXS9 341 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 LSRQ86X29 649 aaPredicted RBP18.92■□□□□ 0.62
EBF1-202ENST00000380654 SLC34A3Q8N130 599 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 RAB42Q8N4Z0 105 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 SUN3Q8TAQ9 357 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 MS4A6EQ96DS6 147 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 CNRIP1Q96F85 164 aaPredicted RBP18.92■□□□□ 0.62
EBF1-202ENST00000380654 C16orf58Q96GQ5 468 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 ZNF764Q96H86 408 aaPredicted RBP18.92■□□□□ 0.62
EBF1-202ENST00000380654 TAPBPLQ9BX59 468 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 RSPH9Q9H1X1 276 aaPredicted RBP18.92■□□□□ 0.62
EBF1-202ENST00000380654 HHATLQ9HCP6 504 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 MRPS30Q9NP92 439 aaKnown RBP18.92■□□□□ 0.62
EBF1-202ENST00000380654 MAN2C1Q9NTJ4 1040 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 SACM1LQ9NTJ5 587 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 SPHK1Q9NYA1 384 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 NDOR1Q9UHB4 597 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 DOCK8Q8NF50 2099 aa18.92■□□□□ 0.62
EBF1-202ENST00000380654 HMGN2P05204 90 aaKnown RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 ALOX5P09917 674 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 DRD2P14416 443 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 MMP11P24347 488 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 PKLRP30613 574 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 AGAP7PQ5VUJ5 663 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 RASSF5Q8WWW0 418 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 SLC6A17Q9H1V8 727 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 TVP23BQ9NYZ1 205 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 LSM2Q9Y333 95 aaKnown RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 PDZK1P1A8MUH7 402 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 PRKYO43930 277 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 CSO75390 466 aaKnown RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 CEACAM5P06731 702 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 PIPP12273 146 aaPredicted RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 DDX5P17844 614 aaKnown RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 BUD31P41223 144 aaPredicted RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 ZNF91Q05481 1191 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 DMPKQ09013 629 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 SLC9A5Q14940 896 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 FBXO46Q6PJ61 603 aaPredicted RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 TMEM107Q6UX40 140 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 ZER1Q7Z7L7 766 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 ACOT4Q8N9L9 421 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 TMEM145Q8NBT3 493 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 TRMT61BQ9BVS5 477 aaKnown RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 PRDM7Q9NQW5 492 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 PHPT1Q9NRX4 125 aaPredicted RBP18.91■□□□□ 0.62
EBF1-202ENST00000380654 INIPQ9NRY2 104 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 GPSM3Q9Y4H4 160 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 ASB4Q9Y574 426 aa18.91■□□□□ 0.62
EBF1-202ENST00000380654 TAF4O00268 1085 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 WWP2O00308 870 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 IMPDH2P12268 514 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 HIST1H1TP22492 207 aaPredicted RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 CERS1P27544 350 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 PEBP1P30086 187 aaKnown RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 PPP2R1BP30154 601 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 NTSP30990 170 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 MAT2AP31153 395 aaKnown RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 S100A5P33763 92 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 SEC13P55735 322 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 RAB8AP61006 207 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 ZIC1Q15915 447 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 IQCHQ86VS3 1027 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 RBM12BQ8IXT5 1001 aaKnown RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 OR4K5Q8NGD3 323 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 KLHL6Q8WZ60 621 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 KCNS3Q9BQ31 491 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 FNDC11Q9BVV2 318 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 TSSK6Q9BXA6 273 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 BTBD1Q9H0C5 482 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 A3GALT2U3KPV4 340 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 ATP6V1G1O75348 118 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 NTN1O95631 604 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 TRA2BP62995 288 aaKnown RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 TMEM201Q5SNT2 666 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 KRT73Q86Y46 540 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 OR2L8Q8NGY9 312 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 KXD1Q9BQD3 176 aa18.9■□□□□ 0.62
EBF1-202ENST00000380654 EXOSC4Q9NPD3 245 aaKnown RBP18.9■□□□□ 0.62
EBF1-202ENST00000380654 A0A1W2PRQ8 180 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 TLX2O43763 284 aaPredicted RBP18.89■□□□□ 0.61
EBF1-202ENST00000380654 AIFM1O95831 613 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 CSTF2P33240 577 aaKnown RBP eCLIP18.89■□□□□ 0.61
EBF1-202ENST00000380654 GSTM5P46439 218 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 ABHD17CQ6PCB6 329 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 FAM92BQ6ZTR7 304 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 DGLUCYQ7Z3D6 616 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 ZNF513Q8N8E2 541 aaPredicted RBP18.89■□□□□ 0.61
EBF1-202ENST00000380654 POC5Q8NA72 575 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 GANCQ8TET4 914 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 ZG16BQ96DA0 208 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 TRMT61AQ96FX7 289 aaKnown RBP18.89■□□□□ 0.61
EBF1-202ENST00000380654 TMEM80Q96HE8 168 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 CNPPD1Q9BV87 410 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 FAIM2Q9BWQ8 316 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 SFXN1Q9H9B4 322 aa18.89■□□□□ 0.61
EBF1-202ENST00000380654 EQTNQ9NQ60 294 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms