RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FAM32AQ9Y421 112 aaKnown RBP18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 PCDHGA8Q9Y5G5 932 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 GPC6Q9Y625 555 aaPredicted RBP18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 CACNA1EQ15878 2313 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 TRIM64A6NGJ6 449 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 FAM227AF5H4B4 570 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 LDB3O75112 727 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 SERPINB7O75635 380 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 IFNW1P05000 195 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 CPMP14384 443 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 KCNJ5P48544 419 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 MAN2A2P49641 1150 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 CRISP3P54108 245 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 NR1H2P55055 460 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 CDH12P55289 794 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 SHC2P98077 582 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 ID2Q02363 134 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 KCNC4Q03721 635 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 PROX1Q92786 737 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 GIMAP5Q96F15 307 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 TCTN2Q96GX1 697 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 PIP5K1AQ99755 562 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 ING2Q9H160 280 aa18.64■□□□□ 0.58
PDLIM5-205ENST00000380180 CHRM4P08173 479 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 ITGAMP11215 1152 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 PORP16435 677 aaPredicted RBP18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 TPD52P55327 224 aaPredicted RBP18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 NADK2Q4G0N4 442 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 FAM111BQ6SJ93 734 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 LGI4Q8N135 537 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 OR4C15Q8NGM1 316 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 OR9A4Q8NGU2 314 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 GIPC3Q8TF64 312 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 RASSF5Q8WWW0 418 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 YTHDF1Q9BYJ9 559 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 RIBC2Q9H4K1 309 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 ANKHQ9HCJ1 492 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 BCL2L10Q9HD36 194 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 KRT84Q9NSB2 600 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 ACER3Q9NUN7 267 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 NTMQ9P121 344 aa18.64■□□□□ 0.57
PDLIM5-205ENST00000380180 A0A1B0GVT2 93 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 FGF17O60258 216 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 SRPX2O60687 465 aaPredicted RBP18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 RHCEP18577 417 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 FUT4P22083 530 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 GFERP55789 205 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 GANABQ14697 944 aaKnown RBP18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 GPAT3Q53EU6 434 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 ZNF605Q86T29 641 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 KRT73Q86Y46 540 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 ZNF354BQ96LW1 612 aa18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 NPLQ9BXD5 320 aaPredicted RBP18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 DDX18Q9NVP1 670 aaKnown RBP18.63■□□□□ 0.57
PDLIM5-205ENST00000380180 RHPN2P1A8MT19 583 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 UGT2B11O75310 529 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 RDH16O75452 317 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 OR6B1O95007 311 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 CYP4B1P13584 511 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 ALDH4A1P30038 563 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 TUBA4AP68366 448 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 BNIP3Q12983 259 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 GNA13Q14344 377 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 EXOC3L2Q2M3D2 409 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 PRTGQ2VWP7 1150 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 ZNF691Q5VV52 312 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 NKAIN2Q5VXU1 208 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 SIMC1Q8NDZ2 872 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 BBS10Q8TAM1 723 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 TGM7Q96PF1 710 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 ACTRT3Q9BYD9 372 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 CLCA2Q9UQC9 943 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 RP1P56715 2156 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 A0A087WXM4 84 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 BCKDKO14874 412 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 SOX18P35713 384 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 CLK3P49761 638 aaKnown RBP18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 ISL1P61371 349 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 MICAQ29983 383 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 WDR53Q7Z5U6 358 aaPredicted RBP18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 NCSTNQ92542 709 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 TANKQ92844 425 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 FEVQ99581 238 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 TUBA8Q9NY65 449 aaPredicted RBP18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 LRIT1Q9P2V4 623 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 RHCGQ9UBD6 479 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 RNF215Q9Y6U7 377 aa18.62■□□□□ 0.57
PDLIM5-205ENST00000380180 IGHV5-51A0A0C4DH38 117 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 A0A0G2JPF8 293 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SMIM31A0A1B0GVY4 71 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 HNRNPCL2B2RXH8 293 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 HNRNPCL3B7ZW38 293 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 FFAR1O14842 300 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 PCDH17O14917 1159 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 ASNA1O43681 348 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MED26O95402 600 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 GPR75O95800 540 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms