RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 PSMD8P48556 350 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 STK19P49842 368 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 SELPLGQ14242 412 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PYHIN1Q6K0P9 492 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GID4Q8IVV7 300 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR5W2Q8NH69 310 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GNPDA2Q8TDQ7 276 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 MUL1Q969V5 352 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF514Q96K75 400 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 RNF208Q9H0X6 261 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 MKKSQ9NPJ1 570 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 SCP2D1Q9UJQ7 156 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 MRPS33Q9Y291 106 aaKnown RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 COL22A1Q8NFW1 1626 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 AQP9O43315 295 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 MMP20O60882 483 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 COQ9O75208 318 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 RGS9O75916 674 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 AKR1C4P17516 323 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 DNASE1L1P49184 302 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 HBA1P69905 142 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GSTM4Q03013 218 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TUBB3Q13509 450 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OCLNQ16625 522 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CCDC58Q4VC31 144 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PLBD1Q6P4A8 553 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TMPRSS12Q86WS5 348 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PHF6Q8IWS0 365 aaKnown RBP eCLIP4□□□□□ -1.77
BRCA2-201ENST00000380152 ANKK1Q8NFD2 765 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 WNK3Q9BYP7 1800 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 F5H0A9 414 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 TMX2-CTNND1H3BSU7 103 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 SCAMP2O15127 329 aaKnown RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 GJB5O95377 273 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 SLC16A8O95907 504 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 RENP00797 406 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 FUCA1P04066 466 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 EDNRBP24530 442 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 HSD11B1P28845 292 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 S100A10P60903 97 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TBPL1P62380 186 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PTPRRQ15256 657 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 BEX5Q5H9J7 111 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PLAG1Q6DJT9 500 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 BEST3Q8N1M1 668 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TEX26Q8N6G2 289 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 DBF4BQ8NFT6 615 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR2T11Q8NH01 316 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR51A7Q8NH64 312 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 C7orf34Q96L11 122 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CACNG6Q9BXT2 260 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ACPTQ9BZG2 426 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 SRMSQ9H3Y6 488 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ANKRD33BA6NCL7 494 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CHP2O43745 196 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PRNPP04156 253 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GYPBP06028 91 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 KELP23276 732 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 VIPR1P32241 457 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 AHRP35869 848 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 KCNC1P48547 511 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 RACK1P63244 317 aaKnown RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 TRAM2Q15035 370 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ADPRMQ3LIE5 342 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GTDC1Q4AE62 458 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 SLC22A10Q63ZE4 541 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 C3P1Q6ZMU1 363 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 Q6ZVL8 140 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GPR149Q86SP6 731 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ZSCAN1Q8NBB4 408 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR4E2Q8NGC2 313 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CD200R1Q8TD46 325 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CASTOR1Q8WTX7 329 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 DHRS1Q96LJ7 313 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 C5orf34Q96MH7 638 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 SLC2A13Q96QE2 648 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PCDHB16Q9NRJ7 776 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 COPS7AQ9UBW8 275 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 C5orf42Q9H799 3197 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 RCBTB2O95199 551 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 VNN2O95498 520 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 LAMP1P11279 417 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CFL1P23528 166 aaKnown RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 GABRB3P28472 473 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CCND3P30281 292 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 PPM1AP35813 382 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 PIK3CBP42338 1070 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ACTA2P62736 377 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 ACTG2P63267 376 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 DBPQ10586 325 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 SEC23BQ15437 767 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GPR19Q15760 415 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 CARD16Q5EG05 197 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TCEAL5Q5H9L2 206 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GET4Q7L5D6 327 aaPredicted RBP4□□□□□ -1.77
BRCA2-201ENST00000380152 PDZD3Q86UT5 571 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR10H5Q8NGA6 315 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 OR2L2Q8NH16 312 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 TMEM40Q8WWA1 233 aa4□□□□□ -1.77
BRCA2-201ENST00000380152 GAL3ST4Q96RP7 486 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms