RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 TIMMDC1Q9NPL8 285 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GPRC5BQ9NZH0 403 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 COQ3Q9NZJ6 369 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FLRT3Q9NZU0 649 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF835Q9Y2P0 537 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 MMACHCQ9Y4U1 282 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 POLR3HQ9Y535 204 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PCDHGB6Q9Y5F9 930 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SYCE1LA8MT33 242 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 EIF3HO15372 352 aaKnown RBP eCLIP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 NADKO95544 446 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PCSK2P16519 638 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PTX3P26022 381 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PIK3R1P27986 724 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ABCD3P28288 659 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 UQCRC1P31930 480 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TRHRP34981 398 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 FOXF2Q12947 444 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 MYBPHQ13203 477 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 FNDC7Q5VTL7 733 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PPP4R4Q6NUP7 873 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 LYPD8Q6UX82 237 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SZRD1Q7Z422 152 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 GALNT12Q8IXK2 581 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ST13P4Q8IZP2 240 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TNIP2Q8NFZ5 429 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 METTL6Q8TCB7 284 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 EPS8L3Q8TE67 593 aaKnown RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SPACA9Q96E40 222 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 WDR34Q96EX3 536 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 DMRTA2Q96SC8 542 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ADOQ96SZ5 270 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PIGQQ9BRB3 760 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 MECRQ9BV79 373 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CAPS2Q9BXY5 557 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CXorf21Q9HAI6 301 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 EQTNQ9NQ60 294 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SERHLQ9NQF3 203 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 MTRF1LQ9UGC7 380 aaKnown RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 BAIAP2L1Q9UHR4 511 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 A0A087X1B8 175 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 H0YIV9 168 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 UGT2B11O75310 529 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 IL3P08700 152 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CREB1P16220 341 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ACVR2AP27037 513 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TLX1P31314 330 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 PHBP35232 272 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 DEKP35659 375 aaKnown RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 HSD17B3P37058 310 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CASP9P55211 416 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 DLX5P56178 289 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CLCQ05315 142 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TGM3Q08188 693 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ART3Q13508 389 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SLC10A1Q14973 349 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TBCCQ15814 346 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF791Q3KP31 576 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 UNC50Q53HI1 259 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ARMC3Q5W041 872 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ZCCHC23Q6ZST2 131 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SLC29A4Q7RTT9 530 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 NUDT13Q86X67 352 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CCDC63Q8NA47 563 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 OR52R1Q8NGF1 315 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 OR14A16Q8NHC5 309 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 RHEBL1Q8TAI7 183 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 LINC01560Q8TB33 94 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 UBLCP1Q8WVY7 318 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 RND1Q92730 232 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TMBIM1Q969X1 311 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 KCTD12Q96CX2 325 aaKnown RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 FBXL20Q96IG2 436 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 LURAP1Q96LR2 239 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 NODALQ96S42 347 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 KLHDC3Q9BQ90 382 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 CENPKQ9BS16 269 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 NPLQ9BXD5 320 aaPredicted RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 ACPTQ9BZG2 426 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 DDX31Q9H8H2 851 aaKnown RBP4.28□□□□□ -1.72
C9orf72-203ENST00000380003 LYRM4Q9HD34 91 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 SACM1LQ9NTJ5 587 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 FBXL2Q9UKC9 423 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 UTS2RQ9UKP6 389 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 DLGAP4Q9Y2H0 992 aa4.28□□□□□ -1.72
C9orf72-203ENST00000380003 TRGV5A0A0B4J1U4 118 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 EEF1E1-BLOC1S5C9J1V9 151 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 E9PLN8 166 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 EEF1E1O43324 174 aaKnown RBP4.27□□□□□ -1.73
C9orf72-203ENST00000380003 RIPK2O43353 540 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 GLI4P10075 376 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 CNR1P21554 472 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 TACR1P25103 407 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 MAN2A2P49641 1150 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 SMSP52788 366 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 AP2B1P63010 937 aa4.27□□□□□ -1.73
C9orf72-203ENST00000380003 CAV1Q03135 178 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms