RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ERICH5Q6P6B1 374 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 Q6ZSR6 202 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF438Q7Z4V0 828 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 OR8J2Q8NGG1 315 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 OR2A1Q8NGT9 310 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 GTPBP3Q969Y2 492 aaKnown RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 BBS4Q96RK4 519 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 C1QTNF2Q9BXJ5 285 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 OBP2AQ9NY56 170 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 PGRMC2O15173 223 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CCNDBP1O95273 360 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TBX6O95947 436 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ALPLP05186 524 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ICAM2P13598 275 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 IGFBP5P24593 272 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ETV5P41161 510 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CDK9P50750 372 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 LSM3P62310 102 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CSNK1G2P78368 415 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 BTN3A2P78410 334 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 LGALS3BPQ08380 585 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 SMN1Q16637 294 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 DEFB134Q4QY38 66 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF658BQ4V348 819 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TDHQ8IZJ6 230 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 NLGN4XQ8N0W4 816 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 C11orf65Q8NCR3 313 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 METTL21AQ8WXB1 218 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 KCNC2Q96PR1 638 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TEFMQ96QE5 360 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 C1QTNF7Q9BXJ2 289 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ANKRD60Q9BZ19 345 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 FAM192AQ9GZU8 254 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TAS2R9Q9NYW1 312 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CDC14AQ9UNH5 594 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 SAMD4AQ9UPU9 718 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 MAPRE3Q9UPY8 281 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PLXNA2O75051 1894 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 A0A1B0GWJ7 208 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 A0A1W2PPV9 198 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 FAM220BPB1ANY3 271 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 H3BNH8 94 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CLN5O75503 358 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 DBTP11182 482 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PPP1CAP62136 330 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 SPIBQ01892 262 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 SLAMF1Q13291 335 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ERV3-1Q14264 604 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 DPY19L1Q2PZI1 675 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 SLC36A3Q495N2 470 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ANXA8L1Q5VT79 327 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TMEM126BQ8IUX1 230 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 P3H2Q8IVL5 708 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 OR13H1Q8NG92 308 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ZFP90Q8TF47 636 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 KAT2AQ92830 837 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 LINC00615Q96LM1 132 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 OR2M4Q96R27 311 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 AMBRA1Q9C0C7 1298 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 MUC13Q9H3R2 512 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 REEP1Q9H902 201 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 AHSPQ9NZD4 102 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 MRPS7Q9Y2R9 242 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CAB39Q9Y376 341 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 CACNG2Q9Y698 323 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TICRRQ7Z2Z1 1910 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PLRG1O43660 514 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PCSK6P29122 969 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 NCBP2P52298 156 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 RAB14P61106 215 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PRDX1Q06830 199 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 RAPSNQ13702 412 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 FGD3Q5JSP0 725 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 OR2T5Q6IEZ7 315 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 DEF8Q6ZN54 512 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 MTSS1LQ765P7 747 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TAF8Q7Z7C8 310 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 KLHDC8AQ8IYD2 350 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 OR2T29Q8NH02 315 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 FAM3CQ92520 227 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 AKAP1Q92667 903 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ITPKCQ96DU7 683 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 TOE1Q96GM8 510 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 GDF15Q99988 308 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 NAA50Q9GZZ1 169 aaKnown RBP10.23□□□□□ -0.77
NEDD9-201ENST00000379433 ACSL5Q9ULC5 683 aa10.23□□□□□ -0.77
NEDD9-201ENST00000379433 B4DGG1 531 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SDC3O75056 442 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 M6PRP20645 277 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CDK6Q00534 326 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms