RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CAMKMTQ7Z624 323 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF615Q8N8J6 731 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PNPLA2Q96AD5 504 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 COQ8BQ96D53 544 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 ZBED6CLQ96FA7 236 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 AMDHD1Q96NU7 426 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 UTP23Q9BRU9 249 aaKnown RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 GLIPR2Q9H4G4 154 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CCDC134Q9H6E4 229 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 B3GNT3Q9Y2A9 372 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 A0A087WV62 115 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 OR5H15A6NDH6 313 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TMEM200CA6NKL6 621 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PLOD2O00469 737 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PLOD3O60568 738 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 DIAPH2O60879 1101 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 SSTR4P31391 388 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CLNS1AP54105 237 aaKnown RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 MLC1Q15049 377 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TLR1Q15399 786 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 FAM111BQ6SJ93 734 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 GPALPP1Q8IXQ4 340 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 SLC15A4Q8N697 577 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 C17orf47Q8NEP4 570 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 ADCY4Q8NFM4 1077 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 OR9A2Q8NGT5 310 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TP53INP1Q96A56 240 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CCDC28BQ9BUN5 200 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 DPY30Q9C005 99 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 BHLHE41Q9C0J9 482 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TRIM45Q9H8W5 580 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PRODH2Q9UF12 536 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 PRAMEF2O60811 474 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 ITGA10O75578 1167 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 ALDOCP09972 364 aaKnown RBP12.28□□□□□ -0.44
CKAP2-202ENST00000378034 IDO1P14902 403 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 SOX18P35713 384 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
CKAP2-202ENST00000378034 CD97P48960 835 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 TNFSF10P50591 281 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 HLCSP50747 726 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 SSR4P51571 173 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 TUBA3CQ13748 450 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 EBPQ15125 230 aaKnown RBP12.28□□□□□ -0.44
CKAP2-202ENST00000378034 LTB4RQ15722 352 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 GSTA3Q16772 222 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 DPY19L1Q2PZI1 675 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF385BQ569K4 471 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 ANKRD26P1Q6NSI1 321 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 TUBA3EQ6PEY2 450 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 OR7A2PQ8NGA2 310 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 DOK4Q8TEW6 326 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 THAP3Q8WTV1 239 aaPredicted RBP12.28□□□□□ -0.44
CKAP2-202ENST00000378034 TESCQ96BS2 214 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 WWTR1Q9GZV5 400 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 PLA2G3Q9NZ20 509 aa12.28□□□□□ -0.44
CKAP2-202ENST00000378034 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 TRAV17A0A0B4J275 112 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 ANKRD28O15084 1053 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 POLR3GO15318 223 aaPredicted RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 MAN1A2O60476 641 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 CBX7O95931 251 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 CYB561P49447 251 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 IDH3AP50213 366 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 AQP5P55064 265 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 MANFP55145 182 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 DCAF7P61962 342 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 IRX1P78414 480 aaPredicted RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 LSM12Q3MHD2 195 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 TRMT12Q53H54 448 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 PIGGQ5H8A4 983 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 HLA-DQA1Q5Y7H0 255 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 SLC6A19Q695T7 634 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 PTRH1Q86Y79 214 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 DND1Q8IYX4 353 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF843Q8N446 348 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 KRTCAP2Q8N6L1 136 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 C16orf52Q8NHV5 167 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 SLC22A8Q8TCC7 542 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 OR52B2Q96RD2 323 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 TCF7L2Q9NQB0 619 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 BCAP29Q9UHQ4 241 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.44
CKAP2-202ENST00000378034 PCDHGB6Q9Y5F9 930 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 GPR45Q9Y5Y3 372 aa12.27□□□□□ -0.44
CKAP2-202ENST00000378034 ATRXP46100 2492 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 B8ZZF3 427 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 WWP2O00308 870 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 UBDO15205 165 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 COQ9O75208 318 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 OR2J2O76002 312 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms