RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PIK3R1P27986 724 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 IST1P53990 364 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 MYBPHQ13203 477 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 KRTAP21-3Q3LHN1 58 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 CCNYL2Q5T2Q4 361 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 C1orf185Q5T7R7 199 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 PRAMEF20Q5VT98 475 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 OR52E8Q6IFG1 317 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 C7orf57Q8NEG2 295 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 SELENOMQ8WWX9 145 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 PELOQ9BRX2 385 aaKnown RBP17.62■□□□□ 0.41
CBWD3-204ENST00000377349 CXXC4Q9H2H0 198 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 EXO5Q9H790 373 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 AHSPQ9NZD4 102 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 TBK1Q9UHD2 729 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 ACAD8Q9UKU7 415 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 CHCHD2Q9Y6H1 151 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-204ENST00000377349 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.62■□□□□ 0.41
CBWD3-204ENST00000377349 TRGV5A0A0B4J1U4 118 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 A0A1B0GTL3 188 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 A0A1W2PS29 197 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 PPP6CO00743 305 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 PGRMC2O15173 223 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 RIPK2O43353 540 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 CTAG2O75638 210 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 RPS17P08708 135 aaKnown RBP17.61■□□□□ 0.41
CBWD3-204ENST00000377349 TAC1P20366 129 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 PAGE2Q7Z2X7 111 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 LRRC25Q8N386 305 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-204ENST00000377349 SARAFQ96BY9 339 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 SPACA9Q96E40 222 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-204ENST00000377349 JSRP1Q96MG2 331 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-204ENST00000377349 NTMT1Q9BV86 223 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 TMUB1Q9BVT8 246 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 SLC24A3Q9HC58 644 aa17.61■□□□□ 0.41
CBWD3-204ENST00000377349 SUPT7LO94864 414 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SEMA3DO95025 777 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 PDYNP01213 254 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 CLPSP04118 112 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 FAM153BP0C7A2 387 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SSTR4P31391 388 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 ARFIP1P53367 373 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 MAPK12P53778 367 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 KCNJ2P63252 427 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 BIKQ13323 160 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SNTB1Q13884 538 aaKnown RBP17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SLC25A35Q3KQZ1 300 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 FAM153CQ494X1 144 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 WLSQ5T9L3 541 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 RIPPLY2Q5TAB7 128 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 HLA-DQA1Q5Y7H0 255 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SLC22A10Q63ZE4 541 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 MRM1Q6IN84 353 aaKnown RBP17.6■□□□□ 0.41
CBWD3-204ENST00000377349 LETMD1Q6P1Q0 360 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 TRMT10CQ7L0Y3 403 aaKnown RBP17.6■□□□□ 0.41
CBWD3-204ENST00000377349 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 ZNF483Q8TF39 744 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-204ENST00000377349 POM121Q96HA1 1249 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 WWTR1Q9GZV5 400 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 LIME1Q9H400 295 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 LDAHQ9H6V9 325 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 ZFP64Q9NPA5 681 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 SNX6Q9UNH7 406 aa17.6■□□□□ 0.41
CBWD3-204ENST00000377349 FAM221AA4D161 298 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 OR4F21O95013 312 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 ZWINTO95229 277 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 ABHD2P08910 425 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 FBXO45P0C2W1 286 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 NT5EP21589 574 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 DEKP35659 375 aaKnown RBP17.59■□□□□ 0.41
CBWD3-204ENST00000377349 ALDH9A1P49189 494 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 TCHHL1Q5QJ38 904 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-204ENST00000377349 TMEM64Q6YI46 380 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 COMMD6Q7Z4G1 85 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 GALNT12Q8IXK2 581 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 SLC15A4Q8N697 577 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 CDYL2Q8N8U2 506 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 RELL2Q8NC24 303 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-204ENST00000377349 OR10G3Q8NGC4 313 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 MTBPQ96DY7 904 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 SLC6A15Q9H2J7 730 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 DNAJB12Q9NXW2 375 aaKnown RBP17.59■□□□□ 0.41
CBWD3-204ENST00000377349 TMEM216Q9P0N5 145 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 CNOT11Q9UKZ1 510 aaKnown RBP17.59■□□□□ 0.41
CBWD3-204ENST00000377349 DNHD1Q96M86 4753 aa17.59■□□□□ 0.41
CBWD3-204ENST00000377349 KDM4EB2RXH2 506 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-204ENST00000377349 DIAPH2O60879 1101 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ERAL1O75616 437 aaKnown RBP17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ESRRBO95718 433 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 SLC35E2P0CK97 266 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 GCAP28676 217 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 XKP51811 444 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 CLCQ05315 142 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 SPRED3Q2MJR0 410 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 GGTA1PQ4G0N0 100 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ARSKQ6UWY0 536 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ZZZ3Q8IYH5 903 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ULK2Q8IYT8 1036 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 MMP21Q8N119 569 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 NAXEQ8NCW5 288 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms