RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 J3QRK9 145 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ADH7P40394 386 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 PNCKQ6P2M8 343 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 PDZD3Q86UT5 571 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 CLEC4EQ9ULY5 219 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RPH3AQ9Y2J0 694 aaPredicted RBP12.97□□□□□ -0.33
GPC6-201ENST00000377047 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 E7ESA3 106 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ETFAP13804 333 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ZER1Q7Z7L7 766 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 BMFQ96LC9 184 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 MED11Q9P086 117 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ABCD2Q9UBJ2 740 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 TMPRSS11EQ9UL52 423 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ZNF451Q9Y4E5 1061 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 PRSS38A1L453 326 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 C17orf105B2RV13 164 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 GRIK2Q13002 908 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 TUBB3Q13509 450 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RCAN2Q14206 197 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
GPC6-201ENST00000377047 CLEC1AQ8NC01 280 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ECHDC3Q96DC8 303 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ACTRT3Q9BYD9 372 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RNF38Q9H0F5 515 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 DPAGT1Q9H3H5 408 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 CWH43Q9H720 699 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 EURLQ9NYK6 297 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RNF6Q9Y252 685 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 KANTRA0A1W2PQU2 76 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RFXAPO00287 272 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RDH16O75452 317 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RAD51DO75771 328 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ZNF28P17035 718 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 EMP2P54851 167 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 CLDN8P56748 225 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 TMEFF1Q8IYR6 380 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 SPRYD4Q8WW59 207 aaPredicted RBP12.97□□□□□ -0.33
GPC6-201ENST00000377047 APIPQ96GX9 242 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 PCTPQ9UKL6 214 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 NOP16Q9Y3C1 178 aaKnown RBP12.97□□□□□ -0.33
GPC6-201ENST00000377047 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 TCHHQ07283 1943 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 FTCDNL1E5RQL4 147 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 TIMP2P16035 220 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 SLC7A9P82251 487 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ALG10BQ5I7T1 473 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 KCTD9Q7L273 389 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 MDGA1Q8NFP4 955 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 PROKR1Q8TCW9 393 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 DTD2Q96FN9 168 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 HOXD1Q9GZZ0 328 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 C12orf4Q9NQ89 552 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ZNF701Q9NV72 531 aaPredicted RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 A0A0A6YYC8 382 aaPredicted RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 A0A1W2PPK0 400 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 GGT3PA6NGU5 568 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 I3L1I5 382 aaPredicted RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 PEPDP12955 493 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ITIH1P19827 911 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ERVPABLB-1P60509 514 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 BLMHQ13867 455 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 SERTAD2Q14140 314 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 TRMT2BQ96GJ1 504 aaKnown RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 H0YJX3 145 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ADAM12O43184 909 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 CKMT1AP12532 417 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 CD38P28907 300 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 SFTPDP35247 375 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ZXDBP98169 803 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 LIPIQ6XZB0 460 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 LAS2Q8IYD9 372 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 EID2Q8N6I1 236 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 TMIEQ8NEW7 156 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ISG20Q96AZ6 181 aaKnown RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 CCDC106Q9BWC9 280 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 LRRC42Q9Y546 428 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 XPNPEP2O43895 674 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 VNN2O95498 520 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ATF6P18850 670 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 RPS3P23396 243 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■■■■□ 23.9
GPC6-201ENST00000377047 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 ANKDD1AQ495B1 522 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms