RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ACKR4Q9NPB9 350 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 ADAM29Q9UKF5 820 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 A0A0G2JNJ9 132 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 FAM47E-STBD1D6RA91 191 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 NT5EP21589 574 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 TRPC1P48995 793 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 XKP51811 444 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 RPS6KA2Q15349 733 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 TMEM198Q66K66 360 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 ZNF441Q8N8Z8 693 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 OR4F6Q8NGB9 312 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 MTBPQ96DY7 904 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 ZNF597Q96LX8 424 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 ZNF559Q9BR84 538 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 SLC24A3Q9HC58 644 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 Q9UFV3 132 aa19.33■□□□□ 0.68
VSX1-201ENST00000376707 POLQO75417 2590 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 ANKRD33BA6NCL7 494 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 RIPK2O43353 540 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 GUCY1B2O75343 617 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 CT62P0C5K7 136 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 GDF1P27539 372 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 TMED10P49755 219 aaKnown RBP19.32■□□□□ 0.68
VSX1-201ENST00000376707 MAPK12P53778 367 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 NRG3P56975 720 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 FBXW4P57775 412 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 FUT7Q11130 342 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 LCA5Q86VQ0 697 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 NEIL3Q8TAT5 605 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 ZNF483Q8TF39 744 aaPredicted RBP19.32■□□□□ 0.68
VSX1-201ENST00000376707 OR10A5Q9H207 317 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 KCNN3Q9UGI6 736 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 SLC12A4Q9UP95 1085 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 NPFFR2Q9Y5X5 522 aa19.32■□□□□ 0.68
VSX1-201ENST00000376707 DNAJC13O75165 2243 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 TACC2O95359 2948 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 A8MT66 165 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 TRIM3O75382 744 aaPredicted RBP19.31■□□□□ 0.68
VSX1-201ENST00000376707 OTCP00480 354 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 CPMP14384 443 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 PORP16435 677 aaPredicted RBP19.31■□□□□ 0.68
VSX1-201ENST00000376707 ADH7P40394 386 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 MYBPHQ13203 477 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 COMMD6Q7Z4G1 85 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 METTL4Q8N3J2 472 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 ZNF615Q8N8J6 731 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 MYRIPQ8NFW9 859 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 TXLNGYQ9BZA5 131 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 FETUBQ9UGM5 382 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 PCDHGB3Q9Y5G1 929 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 EML6Q6ZMW3 1958 aa19.31■□□□□ 0.68
VSX1-201ENST00000376707 PHF3Q92576 2039 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 C15orf38-AP3S2A0A0A6YYH1 394 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 A0A1B0GTL3 188 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 GOLGA6L10A6NI86 522 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 SNX4O95219 450 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 DEKP35659 375 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 MASP1P48740 699 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 RPP38P78345 283 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 SLC25A35Q3KQZ1 300 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 RIPPLY2Q5TAB7 128 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 CES4AQ5XG92 561 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 RPS27LQ71UM5 84 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 WDR53Q7Z5U6 358 aaPredicted RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 TMEM200AQ86VY9 491 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 LIX1LQ8IVB5 337 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 ULK2Q8IYT8 1036 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 CNPY4Q8N129 248 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 OR7G1Q8NGA0 311 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 SPPL2AQ8TCT8 520 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 TRPC4APQ8TEL6 797 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 RILPQ96NA2 401 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 SECISBP2Q96T21 854 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 FARSBQ9NSD9 589 aaKnown RBP19.3■□□□□ 0.68
VSX1-201ENST00000376707 SNX6Q9UNH7 406 aa19.3■□□□□ 0.68
VSX1-201ENST00000376707 C1orf226A1L170 272 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 PPP6CO00743 305 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 TRAPPC6AO75865 159 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 KRT15P19012 456 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 TSPAN8P19075 237 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 CDH13P55290 713 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 DUSP8Q13202 625 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 BICRALQ6AI39 1079 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 SLC48A1Q6P1K1 146 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 LETMD1Q6P1Q0 360 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 PACS2Q86VP3 889 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 PRR22Q8IZ63 422 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 VWA5B2Q8N398 1253 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 C17orf47Q8NEP4 570 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 ADIPOR1Q96A54 375 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 BRINP2Q9C0B6 783 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 BRF2Q9HAW0 419 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 NMRK1Q9NWW6 199 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 TMEM216Q9P0N5 145 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 PCDHA9Q9Y5H5 950 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 TEP1Q99973 2627 aaKnown RBP19.29■□□□□ 0.68
VSX1-201ENST00000376707 CCDC168Q8NDH2 2452 aa19.29■□□□□ 0.68
VSX1-201ENST00000376707 ERAL1O75616 437 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms