RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 RGS10O43665 173 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SH3BP5O60239 455 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 VIPP01282 170 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 UBL4AP11441 157 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 BCL6P41182 706 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 MICAQ29983 383 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SPDYE7PQ495Y7 208 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 ZNF544Q6NX49 715 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 ZNF438Q7Z4V0 828 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 RAB8BQ92930 207 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 FAM131CQ96AQ9 280 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 HRASLS5Q96KN8 279 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 GABRG3Q99928 467 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 S1PR5Q9H228 398 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 AMBNQ9NP70 447 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 PCDHGA6Q9Y5G7 932 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 A0A0A6YYD5 115 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 A0A1W2PQF6 199 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 CACNB4O00305 520 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 PCDHGA12O60330 932 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 FAM20BO75063 409 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 WBP4O75554 376 aaKnown RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 BCHEP06276 602 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 XCR1P46094 333 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
MSH5-202ENST00000375740 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 RPE65Q16518 533 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 LGI4Q8N135 537 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SPERTQ8NA61 448 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 IL17RCQ8NAC3 791 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 Q96MT0 163 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 PIP5K1AQ99755 562 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 GDF15Q99988 308 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 C1QTNF7Q9BXJ2 289 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 MVB12BQ9H7P6 319 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 SLC6A20Q9NP91 592 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 ACER3Q9NUN7 267 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 CLDN24A6NM45 220 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 C5orf58C9J3I9 102 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 PCDH17O14917 1159 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 PRICKLE3O43900 615 aaPredicted RBP13.21□□□□□ -0.29
MSH5-202ENST00000375740 KCNJ13O60928 360 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 RECKO95980 971 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 PRKACBP22694 351 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 KRT20P35900 424 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 SSR2P43308 183 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 PPP2CBP62714 309 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 PPP2CAP67775 309 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 ZIC1Q15915 447 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 TBRG1Q3YBR2 411 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 TUBA3EQ6PEY2 450 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 ZNF793Q6ZN11 406 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
MSH5-202ENST00000375740 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.29
MSH5-202ENST00000375740 RAB11FIP5Q9BXF6 653 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 FGF22Q9HCT0 170 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 A4GALTQ9NPC4 353 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 SPHK1Q9NYA1 384 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 MYO10Q9HD67 2058 aa13.21□□□□□ -0.29
MSH5-202ENST00000375740 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 CTDSP2O14595 271 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 KLF8O95600 359 aaPredicted RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 EGFP01133 1207 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 ANXA8P13928 327 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 HOXB2P14652 356 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 CRISP3P54108 245 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 CLDN2P57739 230 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 GANABQ14697 944 aaKnown RBP13.21□□□□□ -0.3
MSH5-202ENST00000375740 TCEA2Q15560 299 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 TMEM145Q8NBT3 493 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 APH1BQ8WW43 257 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 SLC38A4Q969I6 547 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 TMEM19Q96HH6 336 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 NECTIN4Q96NY8 510 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 OR51E2Q9H255 320 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 NEUROD4Q9HD90 331 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 RHCGQ9UBD6 479 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 RNF6Q9Y252 685 aa13.21□□□□□ -0.3
MSH5-202ENST00000375740 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms