RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 LRRC57Q8N9N7 239 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NHLRC2Q8NBF2 726 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR10X1Q8NGY0 326 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RBMXL1Q96E39 390 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TSSK3Q96PN8 268 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TWNKQ96RR1 684 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CIB1Q99828 191 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MRPL45Q9BRJ2 306 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ISCUQ9H1K1 167 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 IKZF5Q9H5V7 419 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 QPCTLQ9NXS2 382 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NACAE9PAV3 2078 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TRAV6A0A075B6T7 132 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 A6NIN4 97 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CD300LBA8K4G0 201 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 VEGFDO43915 354 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GOT2P00505 430 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MT-ND4P03905 459 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PNMTP11086 282 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NDUFV2P19404 249 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TGFBR1P36897 503 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SUCLG1P53597 346 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PDK2Q15119 407 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ATP6AP1Q15904 470 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC18A3Q16572 532 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PLA1AQ53H76 456 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 HIST2H3PS2Q5TEC6 136 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 UNC5AQ6ZN44 842 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ABHD12BQ7Z5M8 362 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ACDQ96AP0 544 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FAXDC2Q96IV6 333 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 IER2Q9BTL4 223 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 HCAR1Q9BXC0 346 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 DEFB129Q9H1M3 183 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TVP23BQ9NYZ1 205 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FBXL17Q9UF56 701 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MYH7P12883 1935 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GJE1A6NN92 205 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 H0YAE9 185 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ANXA4P09525 319 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ARP10275 920 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NQO2P16083 231 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NDUFB7P17568 137 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 LAG3P18627 525 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 S1PR1P21453 382 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 BMPR1AP36894 532 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 KIR2DL3P43628 341 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 KHKP50053 298 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CLCN4P51793 760 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RPS18P62269 152 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CLINT1Q14677 625 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PDK4Q16654 411 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GPR33Q49SQ1 333 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FIGNQ5HY92 759 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PRAMEF19Q5SWL8 479 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FSTL4Q6MZW2 842 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ARHGAP11AQ6P4F7 1023 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ARPINQ7Z6K5 226 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FBXW8Q8N3Y1 598 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 KDM1BQ8NB78 822 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR6N2Q8NGY6 317 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF420Q8TAQ5 688 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF596Q8TC21 504 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC22A17Q8WUG5 538 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NT5C3BQ969T7 300 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 UPRTQ96BW1 309 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SENP5Q96HI0 755 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 AQP10Q96PS8 301 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 POP1Q99575 1024 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 BARD1Q99728 777 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MCTS1Q9ULC4 181 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MOB4Q9Y3A3 225 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 A0A1W2PPK0 400 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 XRCC3O43542 346 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MPZL2O60487 215 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PRAMEF4O60810 478 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NXPH3O95157 252 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TXNDC12O95881 172 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MATN1P21941 496 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 VIPR2P41587 438 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GABRB2P47870 512 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 EDDM3BP56851 147 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR8G1Q15617 311 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MSS51Q4VC12 460 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TFAP2EQ6VUC0 442 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CARFQ8N187 725 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CERS5Q8N5B7 392 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF738Q8NE65 137 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 LRRN4Q8WUT4 740 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TRUB1Q8WWH5 349 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TECTBQ96PL2 329 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM246Q9BRR3 403 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 EDEM2Q9BV94 578 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FAM124BQ9H5Z6 455 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZDHHC11Q9H8X9 412 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OXSMQ9NWU1 459 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms