RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 HCN2Q9UL51 889 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MGAT4BQ9UQ53 548 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 ARRDC5A6NEK1 342 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MEN1O00255 615 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CASKO14936 926 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 H1F0P07305 194 aaKnown RBP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 IMPA1P29218 277 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 IL18Q14116 193 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 SLBPQ14493 270 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 WSCD2Q2TBF2 565 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM201Q5SNT2 666 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MZT2BQ6NZ67 158 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CNIH2Q6PI25 160 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 VN1R2Q8NFZ6 395 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 OR52I1Q8NGK6 324 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 C16orf78Q8WTQ4 265 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 GATAD2BQ8WXI9 593 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 AP3S1Q92572 193 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 RAB8BQ92930 207 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 LRR1Q96L50 414 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 NLNQ9BYT8 704 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 TDP1Q9NUW8 608 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MCUBQ9NWR8 336 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 KLHL21Q9UJP4 597 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MRPS23Q9Y3D9 190 aaKnown RBP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CXorf51AA0A1B0GTR3 108 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 ANKDD1BA6NHY2 528 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 TSPAN6O43657 245 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 RAB36O95755 333 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 LGI1O95970 557 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 NR2F6P10588 404 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 PRKAR1AP10644 381 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 P2RY14Q15391 338 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF77Q15935 545 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 PRSS53Q2L4Q9 553 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 C12orf73Q69YU5 71 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 PLCZ1Q86YW0 608 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 FAM109AQ8N4B1 249 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 OTUB2Q96DC9 234 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 PRO3102Q9H379 93 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 KCND3Q9UK17 655 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 SLC30A4O14863 429 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 HPGDSO60760 199 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 CEBPBP17676 345 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 NTHL1P78549 312 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 C19orf57Q0VDD7 668 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF697Q5TEC3 545 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 TCTN3Q6NUS6 607 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 ZBED6CLQ96FA7 236 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 COQ7Q99807 217 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF717Q9BY31 904 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 MKRN2Q9H000 416 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 RBFOX1Q9NWB1 397 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SGTAO43765 313 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SEMA7AO75326 666 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 NME6O75414 186 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 C1QBP02746 253 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 IL3P08700 152 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 CPEP16870 476 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 OPRD1P41143 372 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 DGKGP49619 791 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 FLYWCH1Q4VC44 716 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 WDR45BQ5MNZ6 344 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 PGBD2Q6P3X8 592 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SLCO4C1Q6ZQN7 724 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 FAM92BQ6ZTR7 304 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SHFQ7M4L6 423 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 GPR32P1Q8NGA4 272 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SORBS1Q9BX66 1292 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 PCM1Q15154 2024 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 ATG2AQ2TAZ0 1938 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 LOC102723532A0A0G2JNH3 316 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 FAAHO00519 579 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 LYRM1O43325 122 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 NOS1APO75052 506 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 PSIP1O75475 530 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SLCO2B1O94956 709 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 UQCRC1P31930 480 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 MRPL28Q13084 256 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 GINS1Q14691 196 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF730Q6ZMV8 503 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 Q6ZVL8 140 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 HORMAD2Q8N7B1 307 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SLC38A5Q8WUX1 472 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 TM9SF4Q92544 642 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 UPRTQ96BW1 309 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM19Q96HH6 336 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 CXorf36Q9H7Y0 433 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 DIMT1Q9UNQ2 313 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 SH2B3Q9UQQ2 575 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 GSTK1Q9Y2Q3 226 aa10.5□□□□□ -0.73
CCDC40-203ENST00000374877 HELZP42694 1942 aaKnown RBP10.5□□□□□ -0.73
CCDC40-203ENST00000374877 PLXNB3Q9ULL4 1909 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SLC9A3R1O14745 358 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 NCR1O76036 304 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 CYP2A6P11509 494 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 WNT4P56705 351 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms