RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 EXTL1Q92935 676 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 SLC7A6OSQ96CW6 309 aaPredicted RBP16.39■□□□□ 0.21
PFDN6-201ENST00000374606 DGAT2Q96PD7 388 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 CGREF1Q99674 301 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 PELOQ9BRX2 385 aaKnown RBP16.39■□□□□ 0.21
PFDN6-201ENST00000374606 SPRY4Q9C004 299 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 VN1R1Q9GZP7 353 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 C1orf21Q9H246 121 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
PFDN6-201ENST00000374606 AKIRIN1Q9H9L7 192 aaPredicted RBP16.39■□□□□ 0.21
PFDN6-201ENST00000374606 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 SEMA3GQ9NS98 782 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
PFDN6-201ENST00000374606 CROTQ9UKG9 612 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 PADI1Q9ULC6 663 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 BSNQ9UPA5 3926 aa16.39■□□□□ 0.21
PFDN6-201ENST00000374606 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 MYOCOSA0A1B0GUC4 107 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SYNDIG1LA6NDD5 238 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 OR2W5A6NFC9 320 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 STMND1H3BQB6 276 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SUV39H1O43463 412 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 CNOT3O75175 753 aaKnown RBP16.38■□□□□ 0.21
PFDN6-201ENST00000374606 HEXBP07686 556 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 CD63P08962 238 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SLC35E2P0CK97 266 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 NT5EP21589 574 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 PTPN4P29074 926 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 CPOXP36551 454 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 BIKQ13323 160 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 GAB1Q13480 694 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 LTB4RQ15722 352 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SPDYE7PQ495Y7 208 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 GTDC1Q4AE62 458 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 C6orf163Q5TEZ5 329 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 DLEU7Q6UYE1 221 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ZNF621Q6ZSS3 439 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 TIPARPQ7Z3E1 657 aaKnown RBP16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ARPINQ7Z6K5 226 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ST13P4Q8IZP2 240 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-201ENST00000374606 NLGN4XQ8N0W4 816 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 NLGN4YQ8NFZ3 816 aaPredicted RBP16.38■□□□□ 0.21
PFDN6-201ENST00000374606 TSLPQ969D9 159 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SPSB2Q99619 263 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SLC39A3Q9BRY0 314 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 BTBD10Q9BSF8 475 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ALOXE3Q9BYJ1 711 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 LRMDAQ9H2I8 198 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 CXorf36Q9H7Y0 433 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 TAS2R1Q9NYW7 299 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SLAMF8Q9P0V8 285 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 ACSL6Q9UKU0 697 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 PADI2Q9Y2J8 665 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 CLDN16Q9Y5I7 305 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SNX8Q9Y5X2 465 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 SDK2Q58EX2 2172 aa16.38■□□□□ 0.21
PFDN6-201ENST00000374606 RNF103-CHMP3A0A140T963 221 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 IDSB3KWA1 339 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 RAD1O60671 282 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 SLITRK5O94991 958 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 IFNA16P05015 189 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 CYC1P08574 325 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PTPN6P29350 595 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PTGER1P34995 402 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 STT3AP46977 705 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PSME3P61289 254 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 CPZQ66K79 652 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 TMEM107Q6UX40 140 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 DEFB107AQ8IZN7 70 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PLPP5Q8NEB5 264 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PSMA8Q8TAA3 256 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 CT55Q8WUE5 264 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 HOPXQ9BPY8 73 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-201ENST00000374606 SLC35A5Q9BS91 424 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 CRB3Q9BUF7 120 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 SLC6A13Q9NSD5 602 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 SIRT3Q9NTG7 399 aaPredicted RBP16.37■□□□□ 0.21
PFDN6-201ENST00000374606 SLC25A37Q9NYZ2 338 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 C3orf18Q9UK00 162 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 COL12A1Q99715 3063 aa16.37■□□□□ 0.21
PFDN6-201ENST00000374606 TRBV5-3A0A0A0MS03 114 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 TCRBV16S1A1N1A0A5B0 115 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 RECKO95980 971 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 RAB40ALP0C0E4 278 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 FAM87AP0C7U9 286 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 LIPCP11150 499 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 UQCRC2P22695 453 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 EFNA3P52797 238 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 EMP2P54851 167 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 FOXL2P58012 376 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 TGIF1Q15583 401 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 NSDHLQ15738 373 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
PFDN6-201ENST00000374606 C8orf82Q6P1X6 216 aaPredicted RBP16.36■□□□□ 0.21
PFDN6-201ENST00000374606 TMEM64Q6YI46 380 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms