RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SAR1BQ9Y6B6 198 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 DOCK7Q96N67 2140 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 MBD3L4A6NDZ8 208 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 MBD3L3A6NE82 208 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 MBD3L5A6NJ08 208 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 H0YIV9 168 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 PGRMC2O15173 223 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 GBAP04062 536 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CT62P0C5K7 136 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 BMP7P18075 431 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CRABP2P29373 138 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CASP3P42574 277 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 MASP1P48740 699 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 SORDQ00796 357 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 FUT7Q11130 342 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CUL3Q13618 768 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 SF3B4Q15427 424 aaKnown RBP eCLIP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 KBTBD12Q3ZCT8 623 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 EIPR1Q53HC9 387 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CYP20A1Q6UW02 462 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 PACS2Q86VP3 889 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 KIF18BQ86Y91 864 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 GALNT12Q8IXK2 581 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 PPM1NQ8N819 430 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 ZNF615Q8N8J6 731 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 MBD3L2Q8NHZ7 208 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-202ENST00000374426 NXNL1Q96CM4 212 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 WDYHV1Q96HA8 205 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 TRIB1Q96RU8 372 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 UGT2B28Q9BY64 529 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 WDR41Q9HAD4 459 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 JKAMPQ9P055 326 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 WHRNQ9P202 907 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 ANGPTL3Q9Y5C1 460 aa12.6□□□□□ -0.39
CXCL12-202ENST00000374426 EEF1E1-BLOC1S5C9J1V9 151 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
CXCL12-202ENST00000374426 UGDHO60701 494 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 GSTA2P09210 222 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 DRD2P14416 443 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 CTSSP25774 331 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
CXCL12-202ENST00000374426 NEK2P51955 445 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 NAGLUP54802 743 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 GNG11P61952 73 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 PHEXP78562 749 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 IRF9Q00978 393 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 KEAP1Q14145 624 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 SETDB1Q15047 1291 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.39
CXCL12-202ENST00000374426 PFKFB4Q16877 469 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 WIPI1Q5MNZ9 446 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-202ENST00000374426 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 HLA-DQA1Q5Y7H0 255 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 TIGD3Q6B0B8 471 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 OR52E8Q6IFG1 317 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 NUDT13Q86X67 352 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 PRR22Q8IZ63 422 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 RHEBL1Q8TAI7 183 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 WDR20Q8TBZ3 569 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 KCTD4Q8WVF5 259 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-202ENST00000374426 REPS1Q96D71 796 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 TMEM41AQ96HV5 264 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 SMR3AQ99954 134 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 ERP44Q9BS26 406 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 OR10A5Q9H207 317 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 CALHM2Q9HA72 323 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 GRHL1Q9NZI5 618 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 RNF11Q9Y3C5 154 aa12.59□□□□□ -0.39
CXCL12-202ENST00000374426 CLCA1A8K7I4 914 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 SYCE1LA8MT33 242 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 FOXE1O00358 373 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-202ENST00000374426 GNB5O14775 395 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 IL18BPO95998 194 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 ABCB1P08183 1280 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-202ENST00000374426 GFAPP14136 432 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 S1PR1P21453 382 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 ABCD3P28288 659 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 PTPN6P29350 595 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 HOXC12P31275 282 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 OPRM1P35372 400 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 SOX18P35713 384 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 PAFAH1B1P43034 410 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 ALDH18A1P54886 795 aaKnown RBP12.58□□□□□ -0.4
CXCL12-202ENST00000374426 NRG3P56975 720 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 TOMM20Q15388 145 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 GOLGA7Q7Z5G4 137 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 KRTAP1-3Q8IUG1 177 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 L3MBTL4Q8NA19 623 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 FAM83FQ8NEG4 500 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-202ENST00000374426 C17orf47Q8NEP4 570 aa12.58□□□□□ -0.4
CXCL12-202ENST00000374426 NAPGQ99747 312 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms