RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 DLX3O60479 287 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 RBP1P09455 135 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 ACVR2AP27037 513 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 HSD17B3P37058 310 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 MAN2A2P49641 1150 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 KCNJ2P63252 427 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 RAE1P78406 368 aaKnown RBP13.09□□□□□ -0.31
UBXN11-207ENST00000374223 FUT7Q11130 342 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 NTRK2Q16620 822 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 CCNYL2Q5T2Q4 361 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 TTC19Q6DKK2 380 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-207ENST00000374223 SCIMPQ6UWF3 145 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 SLC29A4Q7RTT9 530 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 REPS1Q96D71 796 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
UBXN11-207ENST00000374223 OR10A5Q9H207 317 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
UBXN11-207ENST00000374223 C2orf92A0A1B0GVN3 265 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 SMIM24O75264 130 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 TRIM3O75382 744 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 SEMA3DO95025 777 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 CPMP14384 443 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 NT5EP21589 574 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 GPX3P22352 226 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 PIK3R1P27986 724 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 CHRNB4P30926 498 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 SERPINB9P50453 376 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 ARFIP1P53367 373 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 PHEXP78562 749 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 TRMT12Q53H54 448 aaKnown RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 DCST1Q5T197 706 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 OR52E8Q6IFG1 317 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 LRRC25Q8N386 305 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 C1orf52Q8N6N3 182 aaKnown RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 NAXEQ8NCW5 288 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 OR4K14Q8NGD5 310 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 OR10Q1Q8NGQ4 319 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 CNRIP1Q96F85 164 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 TMEM237Q96Q45 408 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 NODALQ96S42 347 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 MRPL57Q9BQC6 102 aaKnown RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 MRPL46Q9H2W6 279 aaKnown RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.32
UBXN11-207ENST00000374223 LDAHQ9H6V9 325 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 EHD3Q9NZN3 535 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 ACAD8Q9UKU7 415 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 SLC6A5Q9Y345 797 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 NPFFR2Q9Y5X5 522 aa13.08□□□□□ -0.32
UBXN11-207ENST00000374223 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
UBXN11-207ENST00000374223 CCDC189A1A4V9 331 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 B4DXG7 233 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 MANBAO00462 879 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 ERAL1O75616 437 aaKnown RBP13.07□□□□□ -0.32
UBXN11-207ENST00000374223 CBX7O95931 251 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 CD1EP15812 388 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 MSX1P28360 303 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 PTGDSP41222 190 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 MRPS35P82673 323 aaKnown RBP13.07□□□□□ -0.32
UBXN11-207ENST00000374223 CLCQ05315 142 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 PRICKLE4Q2TBC4 344 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 GGTA1PQ4G0N0 100 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 TMEM211Q6ICI0 200 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 RGS9BPQ6ZS82 235 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 GALNT12Q8IXK2 581 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 SLC15A4Q8N697 577 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 CDYL2Q8N8U2 506 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 SPPL2AQ8TCT8 520 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 MZB1Q8WU39 189 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 SELENOMQ8WWX9 145 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 DIO2Q92813 273 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 ZNF681Q96N22 645 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 TXLNGYQ9BZA5 131 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 EXO5Q9H790 373 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 ZNF180Q9UJW8 692 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 EMCNQ9ULC0 261 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 TIMM22Q9Y584 194 aa13.07□□□□□ -0.32
UBXN11-207ENST00000374223 A0A087WUV0 522 aaPredicted RBP13.06□□□□□ -0.32
UBXN11-207ENST00000374223 EXOC1LA0A1B0GW35 172 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 A0A1W2PPM1 405 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 SYNDIG1LA6NDD5 238 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 GNB5O14775 395 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 RIPK2O43353 540 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 SUSD5O60279 629 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
UBXN11-207ENST00000374223 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 COL6A2P12110 1019 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 ABCD3P28288 659 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 SERPINB3P29508 390 aa13.06□□□□□ -0.32
UBXN11-207ENST00000374223 GALNSP34059 522 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms