RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 AQP7O14520 342 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 BCKDKO14874 412 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 SUSD5O60279 629 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 ULK1O75385 1050 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 SNRPB2P08579 225 aaKnown RBP19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 CHN1P15882 459 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 CSNK2A2P19784 350 aaPredicted RBP19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 HMOX2P30519 316 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 MGAT2Q10469 447 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 LCP2Q13094 533 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 PRICKLE4Q2TBC4 344 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 TMEM64Q6YI46 380 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 RPRMLQ8N4K4 120 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 C17orf47Q8NEP4 570 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 CA5BP1Q8WTZ4 195 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 FAIM2Q9BWQ8 316 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 ZNF703Q9H7S9 590 aaPredicted RBP19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 PNPLA3Q9NST1 481 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 MCM8Q9UJA3 840 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 PSME2Q9UL46 239 aa19.96■□□□□ 0.79
CCDC28B-201ENST00000373602 A0A1W2PPM1 405 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 ANKRD33BA6NCL7 494 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 LRRC3CA6NJW4 275 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 TP53I11O14683 189 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 ERAL1O75616 437 aaKnown RBP19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 ATP1B1P05026 303 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 ENO1P06733 434 aaKnown RBP19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 FEN1P39748 380 aaKnown RBP19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 PKNOX1P55347 436 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 MAP4K2Q12851 820 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 RPS6KA2Q15349 733 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 SH2D5Q6ZV89 423 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 SRRM1Q8IYB3 904 aaKnown RBP19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 VWA5B2Q8N398 1253 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 GBP7Q8N8V2 638 aaPredicted RBP19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 OR5M3Q8NGP4 307 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 KLHL29Q96CT2 875 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 MAT2BQ9NZL9 334 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 ZNF639Q9UID6 485 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 EMCNQ9ULC0 261 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 NPFFR2Q9Y5X5 522 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 PKDREJQ9NTG1 2253 aa19.95■□□□□ 0.78
CCDC28B-201ENST00000373602 HCN1O60741 890 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 GLRA3O75311 464 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 LRATO95237 230 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 RFPL3SP0C7P2 107 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 GPX3P22352 226 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 KIR3DL1P43629 444 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 MAN2A2P49641 1150 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 HTR6P50406 440 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 TBCELQ5QJ74 424 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 FAM111BQ6SJ93 734 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 LRRC25Q8N386 305 aaPredicted RBP19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 OR5M9Q8NGP3 310 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 SPPL2AQ8TCT8 520 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 ASB5Q8WWX0 329 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 RND1Q92730 232 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 DIO2Q92813 273 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 CNRIP1Q96F85 164 aaPredicted RBP19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 ZNF681Q96N22 645 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 SECISBP2Q96T21 854 aaKnown RBP19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 DOHHQ9BU89 302 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 ACPTQ9BZG2 426 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 BRINP2Q9C0B6 783 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 GSTO2Q9H4Y5 243 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 LDAHQ9H6V9 325 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 QPCTLQ9NXS2 382 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 HEY2Q9UBP5 337 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 CFL2Q9Y281 166 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 DTX4Q9Y2E6 619 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 CREBBPQ92793 2442 aa19.94■□□□□ 0.78
CCDC28B-201ENST00000373602 TRGV5A0A0B4J1U4 118 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 FIGNL2A6NMB9 653 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 G3V2L1 256 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 TRIM3O75382 744 aaPredicted RBP19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ESRRBO95718 433 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 SHBGP04278 402 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ACVR2AP27037 513 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 TNFRSF8P28908 595 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 SOX18P35713 384 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ALDH9A1P49189 494 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 TMED10P49755 219 aaKnown RBP19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 NRG3P56975 720 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 FBXW4P57775 412 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 RAE1P78406 368 aaKnown RBP19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 DUSP2Q05923 314 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ACAD11Q709F0 780 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 GDF7Q7Z4P5 450 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ACBD4Q8NC06 268 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 SARAFQ96BY9 339 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 CTHRC1Q96CG8 243 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 CCDC126Q96EE4 140 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 ACKR4Q9NPB9 350 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 TNFRSF10DQ9UBN6 386 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 RNF6Q9Y252 685 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 TIMM22Q9Y584 194 aa19.93■□□□□ 0.78
CCDC28B-201ENST00000373602 NINQ8N4C6 2090 aa19.92■□□□□ 0.78
CCDC28B-201ENST00000373602 SERTM1A2A2V5 107 aa19.92■□□□□ 0.78
CCDC28B-201ENST00000373602 CCDC151A5D8V7 595 aa19.92■□□□□ 0.78
CCDC28B-201ENST00000373602 FOXO6A8MYZ6 492 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms