RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SEC14L4Q9UDX3 406 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 BTNL2Q9UIR0 455 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DMRT1Q9Y5R6 373 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FAM240BA0A1B0GVZ2 78 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LCHNA4D1U4 455 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 INMT-MINDY4F8WBC2 141 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 M0R233 179 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LPLP06858 475 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FHP07954 510 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ANXA6P08133 673 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PRG2P13727 222 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SSTR2P30874 369 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 CD86P42081 329 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MAPK9P45984 424 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 GLRBP48167 497 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 LSSP48449 732 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DNAJB13P59910 316 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MAXP61244 160 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ERVK-25P63136 954 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TAF10Q12962 218 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TP53BP2Q13625 1128 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ALKBH1Q13686 389 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SNTB1Q13884 538 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 IHHQ14623 411 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SSX2Q16385 188 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 KLHL22Q53GT1 634 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 KLHL26Q53HC5 615 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 OR2B11Q5JQS5 317 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 RTL10Q7L3V2 364 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DDX53Q86TM3 631 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FSTL5Q8N475 847 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DCBLD1Q8N8Z6 715 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 GLYATL2Q8WU03 294 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TSPEARQ8WU66 669 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 IGSF8Q969P0 613 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PSMG2Q969U7 264 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PABPC5Q96DU9 382 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MRPS24Q96EL2 167 aaKnown RBP8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM41AQ96HV5 264 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 KLHL5Q96PQ7 755 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 SLC38A3Q99624 504 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 ERVK-6Q9BXR3 956 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MED28Q9H204 178 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NT5DC2Q9H857 520 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 NT5MQ9NPB1 228 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 KRT84Q9NSB2 600 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 MARCH2Q9P0N8 246 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 FBXL2Q9UKC9 423 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 PADI2Q9Y2J8 665 aa8.41□□□□□ -1.06
ATG4A-203ENST00000372232 DRGXA6NNA5 263 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 WBP4O75554 376 aaKnown RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 MMP2P08253 660 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 FPR3P25089 353 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 KCNJ3P48549 501 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 OR4D2P58180 307 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TAS2R39P59534 338 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 DEFA6Q01524 100 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 POU4F1Q01851 419 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 SERTAD2Q14140 314 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 CHRNA6Q15825 494 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 C10orf120Q5SQS8 335 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 LHX8Q68G74 356 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 BICRALQ6AI39 1079 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC8DQ7L1W4 858 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM179BQ7Z7N9 219 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 HIPK1Q86Z02 1210 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 RNF113BQ8IZP6 322 aaKnown RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM132CQ8N3T6 1108 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 OXR1Q8N573 874 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TEX26Q8N6G2 289 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 UXS1Q8NBZ7 420 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 OR11H7Q8NGC8 314 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 DNAJB14Q8TBM8 379 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 CPNE4Q96A23 557 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 ZBED6CLQ96FA7 236 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TRMOQ9BU70 441 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 MCOLN1Q9GZU1 580 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 ELAC1Q9H777 363 aaKnown RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 DDX31Q9H8H2 851 aaKnown RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 STARD7Q9NQZ5 370 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 TLR8Q9NR97 1041 aaKnown RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 GPR55Q9Y2T6 319 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-203ENST00000372232 PKP3Q9Y446 797 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 CASP8AP2Q9UKL3 1982 aa8.4□□□□□ -1.06
ATG4A-203ENST00000372232 FABP12A6NFH5 140 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 KPNA3O00505 521 aaPredicted RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 LYRM1O43325 122 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 LILRB5O75023 590 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 ATG12O94817 140 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 VNN2O95498 520 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 IGLV3-27P01718 113 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 IGFBP5P24593 272 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 LAP3P28838 519 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms