RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PADI2Q9Y2J8 665 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SAMHD1Q9Y3Z3 626 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 SNX11Q9Y5W9 270 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SNX8Q9Y5X2 465 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 PLXND1Q9Y4D7 1925 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 C2CD4DB7Z1M9 353 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 SLC16A6O15403 523 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 DPM1O60762 260 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ACADMP11310 421 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 IGFBP5P24593 272 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 NUDT1P36639 197 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 PRIM2P49643 509 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 CDK6Q00534 326 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ZNF45Q02386 682 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 GALNT5Q7Z7M9 940 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 TRIM69Q86WT6 500 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 TSACCQ96A04 125 aaPredicted RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 KIR3DX1Q9H7L2 352 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 KCNK12Q9HB15 430 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 NDUFAF4Q9P032 175 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 CD207Q9UJ71 328 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 PRAMEF25A6NGN4 478 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 PDPK1O15530 556 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 B4GALT2O60909 372 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ARAFP10398 606 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 TNFRSF1BP20333 461 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 PSMB9P28065 219 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 MASP1P48740 699 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 PCBP3P57721 371 aaKnown RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 RFX4Q33E94 735 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 KIAA1614Q5VZ46 1190 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 FAM109AQ8N4B1 249 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 SLC44A3Q8N4M1 653 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 DENND6BQ8NEG7 585 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 TTLQ8NG68 377 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 ZNF566Q969W8 418 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 DPH7Q9BTV6 452 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 PDP1Q9P0J1 537 aaPredicted RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
GPC3-201ENST00000370818 KLHL20Q9Y2M5 609 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 MTCH2Q9Y6C9 303 aa12.12□□□□□ -0.47
GPC3-201ENST00000370818 WASHC1A8K0Z3 465 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 APOA1P02647 267 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 NAGAP17050 411 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 HTR2BP41595 481 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 RPS26P62854 115 aaKnown RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 ABATP80404 500 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ZNF630Q2M218 657 aaPredicted RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 SAXO2Q658L1 398 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 WASH2PQ6VEQ5 465 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 TDHQ8IZJ6 230 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 EXOSC8Q96B26 276 aaKnown RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 NEURL3Q96EH8 262 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ZNF764Q96H86 408 aaPredicted RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 WDR92Q96MX6 357 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 SARGQ9BW04 601 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 C6orf62Q9GZU0 229 aaPredicted RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 DUSP21Q9H596 190 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 REEP1Q9H902 201 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 TMEM184CQ9NVA4 438 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 TCRBV21S2A2A0A5A6 115 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 SHOXO15266 292 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ITGAMP11215 1152 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ENPP1P22413 925 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 HNRNPA2B1P22626 353 aaKnown RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 RYKP34925 604 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 SSR2P43308 183 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 GSTM5P46439 218 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 DEFA1P59665 94 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 DEFA3P59666 94 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 CCINQ13939 588 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 ELOAQ14241 798 aaKnown RBP12.11□□□□□ -0.47
GPC3-201ENST00000370818 LRRC32Q14392 662 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 CRB2Q5IJ48 1285 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 OR4E2Q8NGC2 313 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 SPPL2AQ8TCT8 520 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 PIK3R3Q92569 461 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 MS4A6EQ96DS6 147 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 TMEM168Q9H0V1 697 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms