RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ACTA2P62736 377 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 ACTG2P63267 376 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 FAM198BQ6UWH4 519 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 COMMD6Q7Z4G1 85 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 B3GNT8Q7Z7M8 397 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 SNIP1Q8TAD8 396 aaKnown RBP16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 C7orf34Q96L11 122 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 PLATP00750 562 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 ALPLP05186 524 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.35■□□□□ 0.212e-13■■■□□ 15.4
PTP4A1-201ENST00000370651 ASB4Q9Y574 426 aa16.35■□□□□ 0.21
PTP4A1-201ENST00000370651 B4GALT2O60909 372 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 STC2O76061 302 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 AHSA1O95433 338 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 IQCF3P0C7M6 154 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 UQCRC1P31930 480 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SHMT2P34897 504 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PCGF2P35227 344 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 EIF1AXP47813 144 aaKnown RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 RGS6P49758 472 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF805Q5CZA5 627 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 CD300LFQ8TDQ1 290 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ATG5Q9H1Y0 275 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SYT4Q9H2B2 425 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ACSL5Q9ULC5 683 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 A0A1B0GVI7 797 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 LOC285095A0A1B0GVY8 99 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 EIF1AYO14602 144 aaKnown RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PTGESO14684 152 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF623O75123 536 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PAHP00439 452 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PET100P0DJ07 73 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 IGFBP4P22692 258 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 AK4P27144 223 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SLAMF1Q13291 335 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 C16orf78Q8WTQ4 265 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SETD7Q8WTS6 366 aaKnown RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 KCNN1Q92952 543 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 IL17FQ96PD4 163 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 UCHL1P09936 223 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SDC1P18827 310 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 CBLP22681 906 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 KCNC1P48547 511 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF33BQ06732 778 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 HYAL2Q12891 473 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 RHEBQ15382 184 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 TBCEQ15813 527 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 USF2Q15853 346 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SPRED1Q7Z699 444 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 GPR149Q86SP6 731 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 RETREG3Q86VR2 466 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PARP16Q8N5Y8 322 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 FAM86B1Q8N7N1 296 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 SMPDL3BQ92485 455 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 C1orf226A1L170 272 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 S1PR1P21453 382 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 FRKP42685 505 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 C2orf27AQ580R0 203 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF534Q76KX8 674 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF551Q7Z340 670 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ANKK1Q8NFD2 765 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 PROKR1Q8TCW9 393 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 IL37Q9NZH6 218 aa16.34■□□□□ 0.21
PTP4A1-201ENST00000370651 MYO18AQ92614 2054 aaKnown RBP16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 LRP6O75581 1613 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 C2orf78A6NCI8 922 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 K7ERQ8 282 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 GSRP00390 522 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 DRD2P14416 443 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 CHMP24386 653 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 C21orf33P30042 268 aaPredicted RBP16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 GHRHRQ02643 423 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 TMEM107Q6UX40 140 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 MZB1Q8WU39 189 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 MUL1Q969V5 352 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 COQ10AQ96MF6 247 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 OR2S2Q9NQN1 319 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 COQ3Q9NZJ6 369 aa16.33■□□□□ 0.21
PTP4A1-201ENST00000370651 KHNYNO15037 678 aaKnown RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 RBMXP38159 391 aaKnown RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 FAM46AQ96IP4 442 aaKnown RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 BTNL2Q9UIR0 455 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 ZNF840PA6NDX5 716 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 CLDN24A6NM45 220 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 GP1BBP13224 206 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 C11orf91Q3C1V1 193 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 PLBD1Q6P4A8 553 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 KCTD18Q6PI47 426 aaPredicted RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 ATOH8Q96SQ7 321 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 A0A1W2PQ09 198 aa16.33■□□□□ 0.2
PTP4A1-201ENST00000370651 M0R129 80 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms