RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 C1QTNF2Q9BXJ5 285 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TRIM2Q9C040 744 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 RHCGQ9UBD6 479 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CPED1A4D0V7 1026 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 K7ESM1 405 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TSC22D2O75157 780 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 JRKO75564 520 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CFIP05156 583 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ITGAMP11215 1152 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 AK4P27144 223 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PKLRP30613 574 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SDC2P34741 201 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GABRA3P34903 492 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 IST1P53990 364 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ADPRHP54922 357 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CXCR4P61073 352 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ID2Q02363 134 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC5A12Q1EHB4 618 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CCSMST1Q4G0I0 132 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 FLYWCH1Q4VC44 716 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF542PQ5EBM4 170 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 C9orf50Q5SZB4 431 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 RNF175Q8N4F7 328 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC15A4Q8N697 577 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PLA2G15Q8NCC3 412 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 OR2L3Q8NG85 312 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MOSPD2Q8NHP6 518 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TRUB1Q8WWH5 349 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PINK1Q9BXM7 581 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 KIR3DX1Q9H7L2 352 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PCDHGB5Q9Y5G0 923 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ANK1P16157 1881 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GON4LQ3T8J9 2241 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZSWIM8A7E2V4 1837 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 DAPL1A0PJW8 107 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 C7orf72A4D263 438 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ANTXRLA6NF34 631 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 AGAP14A8MT82 685 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 LOC110117498-PIK3R3F6TDL0 507 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 H3BMQ9 156 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TFECO14948 347 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 HCN1O60741 890 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF888P0CJ79 500 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ACVR2AP27037 513 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PSMB5P28074 263 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CSTF2P33240 577 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 HOXD12P35452 270 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 OPRD1P41143 372 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 NUDT6P53370 316 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CDH11P55287 796 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SIM1P81133 766 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZXDBP98169 803 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CD47Q08722 323 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 NFATC3Q12968 1075 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TDGQ13569 410 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SERTAD2Q14140 314 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GINS1Q14691 196 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF57Q68EA5 555 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM71E1Q6IPT2 247 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SMARCD3Q6STE5 483 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 DCDC5Q6ZRR9 648 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF367Q7RTV3 350 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GALNT10Q86SR1 603 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC22A16Q86VW1 577 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF440Q8IYI8 595 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TDHQ8IZJ6 230 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC5A8Q8N695 610 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TCEANCQ8N8B7 351 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MINDY2Q8NBR6 621 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 KCT2Q8NC54 265 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 OR6C4Q8NGE1 309 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CNIH3Q8TBE1 160 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 FAR1Q8WVX9 515 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 EID2BQ96D98 161 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF354BQ96LW1 612 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 COG8Q96MW5 612 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TAPBPLQ9BX59 468 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TPSD1Q9BZJ3 242 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 OR52A5Q9H2C5 316 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM38AQ9H6F2 299 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 HHATLQ9HCP6 504 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TNFRSF10DQ9UBN6 386 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF221Q9UK13 617 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MYO16Q9Y6X6 1858 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 HTR3EA5X5Y0 456 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 C9J4A7 227 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRR23D1E9PI22 279 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 FXYD1O00168 92 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 AGRPO00253 132 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 HAT1O14929 419 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PGRMC2O15173 223 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR2B3O76000 313 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 KCNK5O95279 499 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SOX14O95416 240 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ALPLP05186 524 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRR23D2P0DMB1 279 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms