RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF639Q9UID6 485 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 UTS2RQ9UKP6 389 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 CFL2Q9Y281 166 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 DNAJC15Q9Y5T4 150 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 RELNP78509 3460 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 SCN2AQ99250 2005 aa9.12□□□□□ -0.95
CD48-202ENST00000368046 FLNCQ14315 2725 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 TM9SF1O15321 606 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 BIRC5O15392 142 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 ASNA1O43681 348 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 ZNF354AO60765 605 aaPredicted RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 WISP2O76076 250 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CLPSP04118 112 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CHRNGP07510 517 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 LINC00032P0C843 101 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 DDCP20711 480 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 SSTR4P31391 388 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 PMP22Q01453 160 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 ALDH6A1Q02252 535 aaKnown RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 SRSF11Q05519 484 aaKnown RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 EBPQ15125 230 aaKnown RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 CEBPEQ15744 281 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 ZNF791Q3KP31 576 aaPredicted RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 BEND6Q5SZJ8 279 aaPredicted RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 KANK2Q63ZY3 851 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 FAM111BQ6SJ93 734 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 GFRALQ6UXV0 394 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 RTL4Q6ZR62 310 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 ZCCHC23Q6ZST2 131 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 DND1Q8IYX4 353 aaKnown RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 TAGAPQ8N103 731 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CPSF7Q8N684 471 aaKnown RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 ZFP62Q8NB50 900 aaPredicted RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 GOLM1Q8NBJ4 401 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 PSD4Q8NDX1 1056 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 C16orf52Q8NHV5 167 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CTHRC1Q96CG8 243 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CNRIP1Q96F85 164 aaPredicted RBP9.11□□□□□ -0.95
CD48-202ENST00000368046 FRMD6Q96NE9 622 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 CCT7Q99832 543 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 WWTR1Q9GZV5 400 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 TUBB1Q9H4B7 451 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 LRTM1Q9HBL6 345 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 KCNK9Q9NPC2 374 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 SLC35C2Q9NQQ7 365 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 C1orf109Q9NX04 203 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 OSGIN2Q9Y236 505 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 FIS1Q9Y3D6 152 aa9.11□□□□□ -0.95
CD48-202ENST00000368046 WDR91A4D1P6 747 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 CAPN14A8MX76 684 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 SEMA7AO75326 666 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 BCAS2O75934 225 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 AGFG2O95081 481 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 UNC5CO95185 931 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 ZWINTO95229 277 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 NADKO95544 446 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 STSP08842 583 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 NEFHP12036 1026 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 SOX18P35713 384 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 SERPINB4P48594 390 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 MEOX1P50221 254 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 NR0B1P51843 470 aaKnown RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 DUSP2Q05923 314 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 RBPJQ06330 500 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 ZNF763Q0D2J5 394 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 MPP2Q14168 576 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.1□□□□□ -0.95
CD48-202ENST00000368046 RFTN2Q52LD8 501 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 TRMT12Q53H54 448 aaKnown RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 SH2D4BQ5SQS7 431 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 SLC22A10Q63ZE4 541 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 FAM71E1Q6IPT2 247 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 FAM180BQ6P0A1 224 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 BNC2Q6ZN30 1099 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 TICAM1Q8IUC6 712 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 LRRC25Q8N386 305 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 C17orf47Q8NEP4 570 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 ADCY4Q8NFM4 1077 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 PPP1R14CQ8TAE6 165 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 EXOSC8Q96B26 276 aaKnown RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 ERP27Q96DN0 273 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 GPR137Q96N19 417 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 EBPLQ9BY08 206 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 BRINP2Q9C0B6 783 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 STMN4Q9H169 189 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 MYNNQ9NPC7 610 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 PFDN4Q9NQP4 134 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 GIMAP4Q9NUV9 329 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 BCAP29Q9UHQ4 241 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 ZDHHC2Q9UIJ5 367 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 SLC5A6Q9Y289 635 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 TMED5Q9Y3A6 229 aa9.1□□□□□ -0.95
CD48-202ENST00000368046 POLR3HQ9Y535 204 aaPredicted RBP9.1□□□□□ -0.95
CD48-202ENST00000368046 A0A1B0GUH1 482 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 WIPF3A6NGB9 483 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms