RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ZNF581Q9P0T4 197 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SEC14L4Q9UDX3 406 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 TRIM10Q9UDY6 481 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ENTPD4Q9Y227 616 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 KNSTRNQ9Y448 316 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SMAD5-AS1Q9Y6J3 95 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 AFF2P51816 1311 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 TRBV2A0A0J9YWF9 115 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 E9PAM4 449 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 E2F3O00716 465 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 MCF2LO15068 1137 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 LRRTM2O43300 516 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 BCL2L11O43521 198 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF354AO60765 605 aaPredicted RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 SYNGR4O95473 234 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 HIST1H2AGP0C0S8 130 aaPredicted RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZCCHC18P0CG32 403 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 HSD17B1P14061 328 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 UCP1P25874 307 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 CALML3P27482 149 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 MAT2AP31153 395 aaKnown RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 MATKP42679 507 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 PTGER3P43115 390 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 CSRP3P50461 194 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 CCL11P51671 97 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 NDST1P52848 882 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 RAG2P55895 527 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 LTB4RQ15722 352 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZKSCAN8Q15776 578 aaPredicted RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 C15orf32Q32M92 178 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 VWA2Q5GFL6 755 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC22A16Q86VW1 577 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ERC1Q8IUD2 1116 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 HIST1H2ACQ93077 130 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ST6GALNAC5Q9BVH7 336 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 NLNQ9BYT8 704 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 NRN1Q9NPD7 142 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 HPS4Q9NQG7 708 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 TUBGCP4Q9UGJ1 667 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 ATG4BQ9Y4P1 393 aa3.31□□□□□ -1.88
RNU6-560P-201ENST00000364007 SYNJ2O15056 1496 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 A0A0A6YYD4 124 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 TMEM89A2RUT3 159 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC9B1P1A6NJY1 282 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF253O75346 499 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SRSF10O75494 262 aaKnown RBP3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 BAG2O95816 211 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC4A1P02730 911 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 GNSP15586 552 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 AHCYP23526 432 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 PPP2R1BP30154 601 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ATP6V1E1P36543 226 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 NPY2RP49146 381 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 CASP9P55211 416 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 CRMP1Q14194 572 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 CARTPTQ16568 116 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF528Q3MIS6 628 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 HERC4Q5GLZ8 1057 aaPredicted RBP3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ABRAXAS1Q6UWZ7 409 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 PRSS48Q7RTY5 328 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 YRDCQ86U90 279 aaKnown RBP3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 LUZP1Q86V48 1076 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC39A11Q8N1S5 342 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 TMEM37Q8WXS4 190 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 TMEM45BQ96B21 275 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 BIRC7Q96CA5 298 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 COQ7Q99807 217 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SIRPDQ9H106 197 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 SYTL2Q9HCH5 934 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 GPR83Q9NYM4 423 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 MLXQ9UH92 298 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 DNPEPQ9ULA0 475 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 RNF24Q9Y225 148 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF175Q9Y473 711 aa3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 KLF2Q9Y5W3 355 aaPredicted RBP3.3□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZMYM6O95789 1325 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 RPGRIP1LQ68CZ1 1315 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 TRAV9-2A0A087WT02 112 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 SAP18O00422 153 aaKnown RBP3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZBTB14O43829 449 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 SRPX2O60687 465 aaPredicted RBP3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 PDGFBP01127 241 aaPredicted RBP3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 PROS1P07225 676 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 APRTP07741 180 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 CYP11B1P15538 503 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 SAA4P35542 130 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 IST1P53990 364 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 BTG3Q14201 252 aaPredicted RBP3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC22A6Q4U2R8 563 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 C14orf28Q4W4Y0 310 aa3.29□□□□□ -1.88
RNU6-560P-201ENST00000364007 ACER2Q5QJU3 275 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms