RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ALX3O95076 343 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 TFPIP10646 304 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 NDUFV2P19404 249 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ADH7P40394 386 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ZNF140P52738 457 aaPredicted RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 ZNF33BQ06732 778 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 NOGQ13253 232 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 NADSYN1Q6IA69 706 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 METTL2BQ6P1Q9 378 aaKnown RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 IQCF2Q8IXL9 164 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CTRCQ99895 268 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 KLK4Q9Y5K2 254 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CFAP20Q9Y6A4 193 aaKnown RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 ECM29Q5VYK3 1845 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 TRBV23OR9-2A0A075B6M9 112 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 WRBO00258 174 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 POP7O75817 140 aaKnown RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 IL32P24001 234 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 GPR4P46093 362 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 GHRHRQ02643 423 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CASTOR1Q8WTX7 329 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CIDECQ96AQ7 238 aaPredicted RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 TESCQ96BS2 214 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 OTUB2Q96DC9 234 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 RNF208Q9H0X6 261 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SRMSQ9H3Y6 488 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SOX30O94993 753 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SCGB1D2O95969 90 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CYP17A1P05093 508 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SSTR2P30874 369 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 HACD4Q5VWC8 232 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 FOXRED2Q8IWF2 684 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 JAGN1Q8N5M9 183 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 GLOD5A6NK44 160 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 CLDN4O14493 209 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ZNF20P17024 532 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 TBPL1P62380 186 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 OVCA2Q8WZ82 227 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 LAMP5Q9UJQ1 280 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 MEN1O00255 615 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 E2F3O00716 465 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 PTHP01270 115 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 LAG3P18627 525 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 HMGCLP35914 325 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 AFF1P51825 1210 aaKnown RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 TAP2Q03519 686 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 ESCO2Q56NI9 601 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 OR4K5Q8NGD3 323 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 KCNN1Q92952 543 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 BRF2Q9HAW0 419 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 YIPF1Q9Y548 306 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3DA0A087WVF3 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3IA0A087WXS9 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3EA0A087X179 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3KA0A087X1G2 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3FA6NER0 549 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3LB9A6J9 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 PRAF2O60831 178 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3HP0C7X1 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 PYCR1P32322 319 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 CTSL3PQ5NE16 218 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3GQ6DHY5 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3CQ6IPX1 549 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TBC1D3Q8IZP1 549 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 SORCS1Q8WY21 1168 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 PSD2Q9BQI7 771 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 CORINQ9Y5Q5 1042 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TRBV2A0A0J9YWF9 115 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TSPAN6O43657 245 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 IFNA21P01568 189 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 RAB40BQ12829 278 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 ABCA11PQ4W5N1 156 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 ECHDC3Q96DC8 303 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 ARNT2Q9HBZ2 717 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 THSD1Q9NS62 852 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 DEC1Q9P2X7 70 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 WASH4PA8MWX3 477 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 FMO6PO60774 539 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 GPR37L1O60883 481 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 FKTNO75072 461 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 SCG5P05408 212 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 EPHX1P07099 455 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 RORAP35398 523 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 IGFALSP35858 605 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 TMEM115Q12893 351 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 ENPP2Q13822 863 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 SPRYD4Q8WW59 207 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 SLC2A11Q9BYW1 496 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms