RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 PHF7Q9BWX1 381 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.48□□□□□ -0.892e-7■■■■□ 22.9
SIN3A-201ENST00000360439 IPPKQ9H8X2 491 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 PRDM8Q9NQV8 689 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ZNF490Q9ULM2 529 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 TBC1D24Q9ULP9 559 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ARL5AQ9Y689 179 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 OR2AT4A6NND4 320 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 UPK3BL1B0FP48 263 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 B4E171 279 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 UPK3BL2E5RIL1 263 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 RFXANKO14593 260 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MPZL2O60487 215 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 LAMP2P13473 410 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ZNF26P17031 533 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 IGFBP6P24592 240 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SOAT1P35610 550 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CLCN4P51793 760 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 GABREP78334 506 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 REEP5Q00765 189 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SEMA3BQ13214 749 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SPRED1Q7Z699 444 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 APCDD1Q8J025 514 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SLC22A14Q9Y267 594 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 EP400Q96L91 3159 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 FAM220BPB1ANY3 271 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 LINC01565O15544 149 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 LCMT2O60294 686 aaKnown RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MAPK3P27361 379 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CHI3L1P36222 383 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CRATP43155 626 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MXD1Q05195 221 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SERINC3Q13530 473 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 BCL7AQ4VC05 210 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 AKR1C8PQ5T2L2 129 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 VHLLQ6RSH7 139 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 GAREM2Q75VX8 874 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 PAQR7Q86WK9 346 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 RNFT2Q96EX2 444 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 KLHDC7BQ96G42 594 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CDKN2AIPNLQ96HQ2 116 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ASF1BQ9NVP2 202 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SAMHD1Q9Y3Z3 626 aaKnown RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 A0A1B0GTW7 788 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 OR14I1A6ND48 311 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 NME4O00746 187 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MID1O15344 667 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 PRAMEF2O60811 474 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 PRAMEF11O60813 436 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MED6O75586 246 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 CLDN9O95484 217 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 F7P08709 466 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ACP5P13686 325 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 PAICSP22234 425 aaKnown RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 DNASE1P24855 282 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 RGS1Q08116 209 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 GRB7Q14451 532 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ELAVL3Q14576 367 aaKnown RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 AANATQ16613 207 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 EML3Q32P44 896 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 HSF5Q4G112 596 aaPredicted RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 RNASE12Q5GAN4 147 aaKnown RBP9.48□□□□□ -0.89
SIN3A-201ENST00000360439 LIPIQ6XZB0 460 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 ZFAND4Q86XD8 727 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 FRS2Q8WU20 508 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 UFD1Q92890 307 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SLC25A36Q96CQ1 311 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 MAP3K3Q99759 626 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 SLC19A3Q9BZV2 496 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 C1orf109Q9NX04 203 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 STUB1Q9UNE7 303 aa9.48□□□□□ -0.89
SIN3A-201ENST00000360439 FABP12A6NFH5 140 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 LILRB3O75022 631 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 FMO3P31513 532 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 TGFBR2P37173 567 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
SIN3A-201ENST00000360439 IRF8Q02556 426 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 CREB3L2Q70SY1 520 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 LILRA2Q8N149 483 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 SIDT2Q8NBJ9 832 aaKnown RBP9.47□□□□□ -0.89
SIN3A-201ENST00000360439 TMEM80Q96HE8 168 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 LOC100130705A0A1B0GUX0 176 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 ANKDD1BA6NHY2 528 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 B4DGG1 531 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 K7ERQ8 282 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 ACOX3O15254 700 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 CNTN1Q12860 1018 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 SF1Q15637 639 aaKnown RBP9.47□□□□□ -0.89
SIN3A-201ENST00000360439 ATG9BQ674R7 924 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 FCRLBQ6BAA4 426 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 RPL13AP3Q6NVV1 102 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
SIN3A-201ENST00000360439 PAQR3Q6TCH7 311 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms