RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 RTCAO00442 366 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF682O95780 498 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SEMG1P04279 462 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 NTRK1P04629 796 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 CHRM5P08912 532 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 UQCRC2P22695 453 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 BCL6P41182 706 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 MAP2K4P45985 399 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 EPS8Q12929 822 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 PRSS53Q2L4Q9 553 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ADPRMQ3LIE5 342 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TMEM236Q5W0B7 351 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TTC23Q5W5X9 447 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SLCO6A1Q86UG4 719 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ZDHHC21Q8IVQ6 265 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ARL14Q8N4G2 192 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 NDNFQ8TB73 568 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ZFPM2Q8WW38 1151 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TMEM38AQ9H6F2 299 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 A0A0A6YYD5 115 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC1A7O00341 560 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TNFRSF21O75509 655 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 DRD2P14416 443 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 FMO3P31513 532 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 FRKP42685 505 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 CRATP43155 626 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TUBA3CQ13748 450 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 OXA1LQ15070 435 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF425Q6IV72 752 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SAP25Q8TEE9 199 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 LOXL4Q96JB6 756 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ALPK1Q96QP1 1244 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 ALOXE3Q9BYJ1 711 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 B3GNT4Q9C0J1 378 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TWSG1Q9GZX9 223 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SPHK1Q9NYA1 384 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TAS2R7Q9NYW3 318 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 ISM1B1AKI9 464 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 PPM1DO15297 605 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 IL5RAQ01344 420 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 IFITM3Q01628 133 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 DNASE1L3Q13609 305 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 GCNT6Q5T4J0 391 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 MFSD9Q8NBP5 474 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 SRFBP1Q8NEF9 429 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 MUL1Q969V5 352 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 NODALQ96S42 347 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 BARD1Q99728 777 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 TP63Q9H3D4 680 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 MARCH7Q9H992 704 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 LOC100130705A0A1B0GUX0 176 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 HAT1O14929 419 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 PDPK1O15530 556 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 ICMTO60725 284 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 DPM1O60762 260 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 NUDT7P0C024 238 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 ENPP1P22413 925 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 TGFBR1P36897 503 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 DGCR6Q14129 220 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 KIR2DS3Q14952 304 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 CTF1Q16619 201 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 KANSL1Q7Z3B3 1105 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 SLC30A8Q8IWU4 369 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 SLC35F3Q8IY50 421 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 OR10G6Q8NH81 332 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 SRMSQ9H3Y6 488 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
CSNK1E-201ENST00000359867 NEUROD4Q9HD90 331 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms