RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OR9A2Q8NGT5 310 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PEX11GQ96HA9 241 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM38AQ9H6F2 299 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 C6orf203Q9P0P8 240 aaPredicted RBP13□□□□□ -0.33
PDLIM5-203ENST00000359265 FAF1Q9UNN5 650 aaPredicted RBP13□□□□□ -0.33
PDLIM5-203ENST00000359265 MAP4K5Q9Y4K4 846 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 AP4S1Q9Y587 144 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PCDHGA1Q9Y5H4 931 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 ACACAQ13085 2346 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 URB1O60287 2271 aaKnown RBP13□□□□□ -0.33
PDLIM5-203ENST00000359265 APC2O95996 2303 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 A0A1W2PS29 197 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 CLDN4O14493 209 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF749O43361 778 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 KALRNO60229 2985 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 FGF17O60258 216 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 LDB3O75112 727 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 TNFRSF21O75509 655 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 SLITRK5O94991 958 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 BMP10O95393 424 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 IFI6P09912 130 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ARAFP10398 606 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 IL10P22301 178 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 PRIM2P49643 509 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 KHKP50053 298 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF630Q2M218 657 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 RBM44Q6ZP01 1051 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 TTLL10Q6ZVT0 673 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 OR4N5Q8IXE1 308 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ADGRG5Q8IZF4 528 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 EID3Q8N140 333 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 METTL27Q8N6F8 245 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM52Q8NDY8 209 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 OR51Q1Q8NH59 317 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 CANT1Q8WVQ1 401 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 UGT2B28Q9BY64 529 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC7A5P2Q9GIP4 190 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 CCM2LQ9NUG4 571 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 OLAHQ9NV23 265 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 GPATCH2Q9NW75 528 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 THUMPD1Q9NXG2 353 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 AKAP7Q9P0M2 348 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 RARRES3Q9UL19 164 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 AURKCQ9UQB9 309 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 ANGPT4Q9Y264 503 aa12.99□□□□□ -0.33
PDLIM5-203ENST00000359265 MYO18BQ8IUG5 2567 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 A0A1B0GX78 115 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 TMX2-CTNND1H3BSU7 103 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ATP1B1P05026 303 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 NUDT7P0C024 238 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 HOXB6P17509 224 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ALAS2P22557 587 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 MC3RP41968 323 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ID2Q02363 134 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 SCARB2Q14108 478 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 LTB4RQ15722 352 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ADRM1Q16186 407 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 TBCELQ5QJ74 424 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 CEACAM20Q6UY09 585 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 GLRX5Q86SX6 157 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 RCBTB1Q8NDN9 531 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ELP4Q96EB1 424 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 RNF145Q96MT1 663 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 MS4A4EQ96PG1 132 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 CCDC86Q9H6F5 360 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 ARMC1Q9NVT9 282 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 SIDT1Q9NXL6 827 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 PTGFRNQ9P2B2 879 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM247A6NEH6 219 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 PLOD2O00469 737 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 HNRNPRO43390 633 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 OR10H2O60403 315 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 B4GALT2O60909 372 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 CTNSO60931 367 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 SERPINA1P01009 418 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 FCGR1AP12314 374 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 NT5EP21589 574 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 CCKBRP32239 447 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 PTGER1P34995 402 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 GCKP35557 465 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 XCR1P46094 333 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms