RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 BTBD16Q32M84 506 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 PAGE3Q5JUK9 113 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 DCAF10Q5QP82 559 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
CCNE1-202ENST00000357943 SLC2A7Q6PXP3 512 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 FITM2Q8N6M3 262 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 MORN4Q8NDC4 146 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 OR1N1Q8NGS0 311 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 ZFP28Q8NHY6 868 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 NCLNQ969V3 563 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 ERP27Q96DN0 273 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 ELP4Q96EB1 424 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 FBXL20Q96IG2 436 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 VPS50Q96JG6 964 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 MAGED4Q96JG8 741 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 INPP5KQ9BT40 448 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 CXorf36Q9H7Y0 433 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 SERHLQ9NQF3 203 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 SIRT3Q9NTG7 399 aaPredicted RBP13.85□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF639Q9UID6 485 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 PPIEQ9UNP9 301 aaKnown RBP13.85□□□□□ -0.19
CCNE1-202ENST00000357943 POLHQ9Y253 713 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 MAN2B2Q9Y2E5 1009 aa13.85□□□□□ -0.19
CCNE1-202ENST00000357943 ATMQ13315 3056 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 A0A1W2PP18 115 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 ARGFXA6NJG6 315 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CAPN14A8MX76 684 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 PLOD2O00469 737 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 SLC22A2O15244 555 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CBX7O95931 251 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CLPSP04118 112 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CDKN2CP42773 168 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 TMPRSS3P57727 454 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 FUT7Q11130 342 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 EXOSC7Q15024 291 aaKnown RBP13.84□□□□□ -0.19
CCNE1-202ENST00000357943 TLR1Q15399 786 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 DEFB109BQ30KR1 87 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 C6orf163Q5TEZ5 329 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 KIF2BQ8N4N8 673 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 POU5F2Q8N7G0 328 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 GTF2H4Q92759 462 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 FER1L6-AS2Q96M78 137 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 CCDC115Q96NT0 180 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 PANX1Q96RD7 426 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 TRIM4Q9C037 500 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 NEUROD4Q9HD90 331 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 TAS2R9Q9NYW1 312 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 SLAMF8Q9P0V8 285 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 BTNL2Q9UIR0 455 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF223Q9UK11 482 aaPredicted RBP13.84□□□□□ -0.19
CCNE1-202ENST00000357943 ZMIZ1Q9ULJ6 1067 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
CCNE1-202ENST00000357943 UPK1AO00322 258 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 RFXANKO14593 260 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 PLOD3O60568 738 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 NME6O75414 186 aaPredicted RBP13.83□□□□□ -0.2
CCNE1-202ENST00000357943 GSNP06396 782 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 UCNP55089 124 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 DUSP8Q13202 625 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 EXT1Q16394 746 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 FHL5Q5TD97 284 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 MSANTD1Q6ZTZ1 278 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 RETREG3Q86VR2 466 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 SNX32Q86XE0 403 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 ZNF615Q8N8J6 731 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 TMEM102Q8N9M5 508 aaPredicted RBP13.83□□□□□ -0.2
CCNE1-202ENST00000357943 OR52R1Q8NGF1 315 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 ELP5Q8TE02 316 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 ART5Q96L15 291 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 SEMA4CQ9C0C4 833 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 OR10A5Q9H207 317 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 RMND5AQ9H871 391 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 DDX18Q9NVP1 670 aaKnown RBP13.83□□□□□ -0.2
CCNE1-202ENST00000357943 PCDHGB4Q9UN71 923 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 NDUFAF1Q9Y375 327 aa13.83□□□□□ -0.2
CCNE1-202ENST00000357943 DSPP15924 2871 aaKnown RBP13.83□□□□□ -0.2
CCNE1-202ENST00000357943 A0A087WV62 115 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 FBP2O00757 339 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 PRKNO60260 465 aaPredicted RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 SLITRK5O94991 958 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ICAM2P13598 275 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 SLC37A1P57057 533 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 GAB1Q13480 694 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 C6orf10Q5SRN2 563 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 OR2L13Q8N349 312 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CLEC1AQ8NC01 280 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 OR5AK3PQ8NH89 298 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 GOT1L1Q8NHS2 421 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms