RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NR2F6P10588 404 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ENPP1P22413 925 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CPN2P22792 545 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 WNT4P56705 351 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TEKQ02763 1124 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PRKCZQ05513 592 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MRPL28Q13084 256 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF628Q5EBL2 1059 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 BCL2L15Q5TBC7 163 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 C12orf73Q69YU5 71 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 C22orf39Q6P5X5 142 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 OR8H3Q8N146 312 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 OR4K5Q8NGD3 323 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.6□□□□□ -0.875e-7■■■■■ 65.3
PTPRA-203ENST00000356147 ZFPM2Q8WW38 1151 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 RASSF5Q8WWW0 418 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PPIL3Q9H2H8 161 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 RBFOX1Q9NWB1 397 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF222Q9UK12 451 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 FBXW2Q9UKT8 454 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PLXNB3Q9ULL4 1909 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SLC30A4O14863 429 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 PPM1DO15297 605 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 PRKRAO75569 313 aaKnown RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 XPAP23025 273 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SSTR2P30874 369 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 GIPRP48546 466 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SRP9P49458 86 aaKnown RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 FCN2Q15485 313 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 MEDAGQ5VYS4 303 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 ASTLQ6HA08 431 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 FAM71E1Q6IPT2 247 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 GDPGP1Q6ZNW5 385 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 CAMKMTQ7Z624 323 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SOCS4Q8WXH5 440 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 DACT3Q96B18 629 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 TBX5Q99593 518 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 BRF2Q9HAW0 419 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 ING3Q9NXR8 418 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 CLCA2Q9UQC9 943 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 PRAMEF27A3QJZ7 478 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 TRAPPC2P0DI81 140 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 TRAPPC2BP0DI82 140 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 PRKAR1AP10644 381 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 CPEP16870 476 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 RRAS2P62070 204 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-203ENST00000356147 ABATP80404 500 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SP140Q13342 867 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 KRT74Q7RTS7 529 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 C6orf120Q7Z4R8 191 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 FAM181AQ8N9Y4 354 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 BEST4Q8NFU0 473 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 NEIL3Q8TAT5 605 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 CYB5D2Q8WUJ1 264 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 ARMC5Q96C12 935 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 F2RL3Q96RI0 385 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 MCOLN1Q9GZU1 580 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 PPP1R3EQ9H7J1 279 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
PTPRA-203ENST00000356147 SYNDIG1LA6NDD5 238 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 LEUTXA8MZ59 168 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 UGDHO60701 494 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PDE9AO76083 593 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLCO2B1O94956 709 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 C1QBP02746 253 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SERPIND1P05546 499 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF250P15622 560 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 GABRR2P28476 465 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 BUD31P41223 144 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ACLYP53396 1101 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 POU4F3Q15319 338 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PLK5Q496M5 336 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TOR2AQ5JU69 321 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SPOUT1Q5T280 376 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 IDNKQ5T6J7 187 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 FAM27D1Q5T7N8 215 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 PXDC1Q5TGL8 231 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF783Q6ZMS7 281 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TCTE3Q8IZS6 198 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 CLDN22Q8N7P3 220 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 OR6T1Q8NGN1 323 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 GOT1L1Q8NHS2 421 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 APOBEC4Q8WW27 367 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 NACC2Q96BF6 587 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM169Q96HH4 297 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ENOPH1Q9UHY7 261 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 KCND3Q9UK17 655 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 MGAT4BQ9UQ53 548 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 FEZF1A0PJY2 475 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ZC3H12DA2A288 527 aaKnown RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 FAM183AA6NL82 134 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLC6A11P48066 632 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 RNF144AP50876 292 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-203ENST00000356147 C21orf58P58505 322 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLC8B1Q6J4K2 584 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 ANKRD54Q6NXT1 300 aa9.58□□□□□ -0.88
PTPRA-203ENST00000356147 SLC30A6Q6NXT4 461 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms