RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TMBIM1Q969X1 311 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 CRYM-AS1A6NIL9 109 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 LRRN3E7EW58 273 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 SCO1O75880 301 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 OLIG2Q13516 323 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 IL17AQ16552 155 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 TPGS2Q68CL5 300 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 SLC2A12Q8TD20 617 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 KLHL9Q9P2J3 617 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 YIPF1Q9Y548 306 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 M0R233 179 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 GPR37L1O60883 481 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 FAM160A2Q8N612 972 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 KCNA7Q96RP8 456 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 GATA5Q9BWX5 397 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 EBF2Q9HAK2 575 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 NDUFV2P19404 249 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PTGR1Q14914 329 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PKDCCQ504Y2 493 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 DDIT4LQ96D03 193 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF358Q9NW07 568 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PLXDC1Q8IUK5 500 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 DCUN1D3Q8IWE4 304 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 DPCDQ9BVM2 203 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 EXTL2Q9UBQ6 330 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 NPHS1O60500 1241 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 BMP4P12644 408 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PAX6P26367 422 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 HTR7P34969 479 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 GPRC6AQ5T6X5 926 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 C15orf52Q6ZUT6 534 aaKnown RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 TXNDC5Q8NBS9 432 aaKnown RBP16.51■□□□□ 0.23
COL27A1-201ENST00000356083 CREB3L4Q8TEY5 395 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 RHBDD3Q9Y3P4 386 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 BMP1P13497 986 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PTH2RP49190 550 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF718Q3SXZ3 478 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 FBXW12Q6X9E4 464 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 FAM117AQ9C073 453 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 OBP2BQ9NPH6 170 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PCDHGA7Q9Y5G6 932 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 SPATA31C1P0DKV0 1188 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 KCNC1P48547 511 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PIGGQ5H8A4 983 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PLCXD1Q9NUJ7 323 aa16.51■□□□□ 0.23
COL27A1-201ENST00000356083 PRICKLE3O43900 615 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-201ENST00000356083 TRAM2Q15035 370 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CST9LP1Q5W188 147 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ALG3Q92685 438 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ITPAQ9BY32 194 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 RARRES3Q9UL19 164 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 PTCHD3Q3KNS1 767 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 DCP2Q8IU60 420 aaKnown RBP16.5■□□□□ 0.23
COL27A1-201ENST00000356083 FBXW5Q969U6 566 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 VDAC3Q9Y277 283 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 MAP2K7O14733 419 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 FMO6PO60774 539 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CKMT2P17540 419 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CYBRD1Q53TN4 286 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 GSG1LQ6UXU4 331 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 GIMAP5Q96F15 307 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 BOLA2-SMG1P6H3BVE0 249 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 DPY19L1Q2PZI1 675 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 OR5M10Q6IEU7 315 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF529Q6P280 563 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 LRRC18Q8N456 261 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CSNK1A1LQ8N752 337 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 MGAT4BQ9UQ53 548 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ATG12O94817 140 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CBSLP0DN79 551 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CBSP35520 551 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CDK3Q00526 305 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 MELKQ14680 651 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 SAMD10Q9BYL1 202 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ACSL5Q9ULC5 683 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 MAB21L2Q9Y586 359 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 FAM230AA0A1W2PPH8 454 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ADRB3P13945 408 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 ANXA7P20073 488 aaKnown RBP16.5■□□□□ 0.23
COL27A1-201ENST00000356083 CD9P21926 228 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 PRKCIP41743 596 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 AGTRAPQ6RW13 159 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 GHRLQ9UBU3 117 aa16.5■□□□□ 0.23
COL27A1-201ENST00000356083 NUDT21O43809 227 aaKnown RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 RHCEP18577 417 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 TEX51A0A1B0GUA7 166 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms