RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 XKRXQ6PP77 449 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 GK5Q6ZS86 529 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 TRILQ7L0X0 811 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC29A4Q7RTT9 530 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 MCEMP1Q8IX19 187 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 ZNF295-AS1Q8N0V1 137 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 FBXW8Q8N3Y1 598 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 FAM13CQ8NE31 585 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 OR2W6PQ8NHA6 318 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC22A8Q8TCC7 542 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 ACMSDQ8TDX5 336 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 NTNG2Q96CW9 530 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 C11orf24Q96F05 449 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SGCZQ96LD1 299 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 PELOQ9BRX2 385 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 EBPLQ9BY08 206 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 NXF5Q9H1B4 397 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 ZNF703Q9H7S9 590 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SNX6Q9UNH7 406 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 FAM215AQ9Y5M1 114 aa15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-201ENST00000355572 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 C2orf92A0A1B0GVN3 265 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 C1orf226A1L170 272 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 HNRNPRO43390 633 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 CLDN14O95500 239 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 P04436 131 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 IL3P08700 152 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 PORP16435 677 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SERPINB3P29508 390 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 NUP107P57740 925 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 MRPS35P82673 323 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 RASA2Q15283 850 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 GXYLT1Q4G148 440 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 TRMT12Q53H54 448 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC22A10Q63ZE4 541 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 ARHGAP11AQ6P4F7 1023 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 ZYG11AQ6WRX3 759 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 FAM109AQ8N4B1 249 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC15A4Q8N697 577 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 METTL6Q8TCB7 284 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 UBLCP1Q8WVY7 318 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SDCCAG3Q96C92 435 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 CTHRC1Q96CG8 243 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SMC6Q96SB8 1091 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 ITPAQ9BY32 194 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC6A15Q9H2J7 730 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 VPS29Q9UBQ0 182 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 PTGDR2Q9Y5Y4 395 aa15.37■□□□□ 0.05
PDLIM7-201ENST00000355572 A0A1B0GVC2 190 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 OR6C76A6NM76 312 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 PLIN3O60664 434 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 TRIM3O75382 744 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 GSTA1P08263 222 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 PCSK2P16519 638 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 ALDH9A1P49189 494 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 BTKQ06187 659 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 CSTF3Q12996 717 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 C10orf62Q5T681 223 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 MTFR2Q6P444 385 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 PAGE2Q7Z2X7 111 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC22A16Q86VW1 577 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 CCDC71Q8IV32 467 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC34A3Q8N130 599 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 SHCBP1LQ9BZQ2 653 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 TRIM8Q9BZR9 551 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 UCK2Q9BZX2 261 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 BRINP2Q9C0B6 783 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 MID1IP1Q9NPA3 183 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 AHSPQ9NZD4 102 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 MCM8Q9UJA3 840 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 EXO1Q9UQ84 846 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 RNF6Q9Y252 685 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 DLGAP4Q9Y2H0 992 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 NPFFR2Q9Y5X5 522 aa15.36■□□□□ 0.05
PDLIM7-201ENST00000355572 INTS1Q8N201 2190 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 ACOT7O00154 380 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 DYRK3O43781 588 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 ATP1B1P05026 303 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 AGAP20933 346 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 TNFRSF8P28908 595 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 HMOX2P30519 316 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 PTGDSP41222 190 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 TRPC1P48995 793 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 SMSP52788 366 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 MAP4K2Q12851 820 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 LCP2Q13094 533 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 SLC22A9Q8IVM8 553 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 C4orf33Q8N1A6 199 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 LRRC25Q8N386 305 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 VWA5B2Q8N398 1253 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 CCNYL1Q8N7R7 359 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 ACBD4Q8NC06 268 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 SPPL2AQ8TCT8 520 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 C16orf78Q8WTQ4 265 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 KLHL29Q96CT2 875 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 PLLPQ9Y342 182 aa15.35■□□□□ 0.05
PDLIM7-201ENST00000355572 PDZD2O15018 2839 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms