RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 OR2M4Q96R27 311 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 SOX17Q9H6I2 414 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 INSL5Q9Y5Q6 135 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF705FA8MVS1 300 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 FTCDNL1E5RQL4 147 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 SOCS5O75159 536 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 SOX30O94993 753 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 STSP08842 583 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF705DP0CH99 300 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF705BP0CI00 300 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 HNRNPKP61978 463 aaKnown RBP eCLIP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 PSPHP78330 225 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 KANK2Q63ZY3 851 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF440Q8IYI8 595 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 PQLC3Q8N755 202 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 GLIS1Q8NBF1 620 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 PELOQ9BRX2 385 aaKnown RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 IL21RQ9HBE5 538 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 C19orf12Q9NSK7 152 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 TMEM45AQ9NWC5 275 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 TAS2R8Q9NYW2 309 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 ALDH3B1P43353 468 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 AKR1C2P52895 323 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 GBX1Q14549 363 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 RNASE10Q5GAN6 216 aaKnown RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 CCBE1Q6UXH8 406 aaPredicted RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 C7orf50Q9BRJ6 194 aaKnown RBP14.23□□□□□ -0.13
LMX1B-201ENST00000355497 DEFB126Q9BYW3 111 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 FAM86C1Q9NVL1 165 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 FAM118AQ9NWS6 357 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 TMEM59LQ9UK28 342 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 GLTPD2A6NH11 291 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 A8MVJ9 347 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 HHLA1C9JL84 531 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 NPRL3Q12980 569 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 SMYD5Q6GMV2 418 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 TEX19Q8NA77 164 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 RCBTB1Q8NDN9 531 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 HSPE1-MOB4S4R3N1 261 aa14.23□□□□□ -0.13
LMX1B-201ENST00000355497 SLIT3O75094 1523 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 A0A0U1RQF3 1178 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 IFNA17P01571 189 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 ARHGAP1Q07960 439 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GRB7Q14451 532 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 RBM39Q14498 530 aaKnown RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SLC18B1Q6NT16 456 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 DNAJA3Q96EY1 480 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 RRNAD1Q96FB5 475 aaKnown RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 TLR9Q9NR96 1032 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 hCG_1807616A0A1W2PRN6 198 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 CENPBD1B2RD01 187 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 AK1P00568 194 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 KCNE1P15382 129 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 PITPNBP48739 271 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 ACTBP60709 375 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 ACTG1P63261 375 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 C2orf76Q3KRA6 126 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 AWAT2Q6E213 333 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SFRP4Q6FHJ7 346 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 PLEKHO2Q8TD55 490 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 TRUB1Q8WWH5 349 aaKnown RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 LRR1Q96L50 414 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SIGLEC10Q96LC7 697 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 OR6C74A6NCV1 312 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GGT3PA6NGU5 568 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SHOXO15266 292 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 HNF1BP35680 557 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 RAET1LQ5VY80 246 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GTPBP8Q8N3Z3 284 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 ACBD4Q8NC06 268 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SPRYD4Q8WW59 207 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 JPH3Q8WXH2 748 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 DAZLQ92904 295 aaKnown RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 PITX2Q99697 317 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SMOQ99835 787 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SYT3Q9BQG1 590 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 SDHDO14521 159 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 AMY2AP04746 511 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 RAB3BP20337 219 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 PROZP22891 400 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GKP32189 559 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GRM2Q14416 872 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 GRASPQ7Z6J2 395 aaPredicted RBP14.22□□□□□ -0.13
LMX1B-201ENST00000355497 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 PSAT1Q9Y617 370 aa14.22□□□□□ -0.13
LMX1B-201ENST00000355497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.21□□□□□ -0.13
LMX1B-201ENST00000355497 TSPAN15O95858 294 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 ETV3P41162 512 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 RPS21P63220 83 aaKnown RBP14.21□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF674Q2M3X9 581 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 ZC3H14Q6PJT7 736 aaKnown RBP14.21□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF783Q6ZMS7 281 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 IGDCC3Q8IVU1 814 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 HINT2Q9BX68 163 aa14.21□□□□□ -0.13
LMX1B-201ENST00000355497 ZFP57Q9NU63 452 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms