RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NAGLUP54802 743 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 SLBPQ14493 270 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDX55-202ENST00000354291 KRTAP24-1Q3LI83 254 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 GRTP1Q5TC63 336 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 TMEM64Q6YI46 380 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 YRDCQ86U90 279 aaKnown RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 PACS2Q86VP3 889 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 OR4N5Q8IXE1 308 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 DND1Q8IYX4 353 aaKnown RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 SPATA6LQ8N4H0 392 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 PPWD1Q96BP3 646 aaKnown RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 ZFP3Q96NJ6 502 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 REG4Q9BYZ8 158 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 REXO4Q9GZR2 422 aaKnown RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 RAB17Q9H0T7 212 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 UBQLN3Q9H347 655 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 COPS7BQ9H9Q2 264 aaPredicted RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 ZNF701Q9NV72 531 aaPredicted RBP14.43□□□□□ -0.1
DDX55-202ENST00000354291 DNAJC11Q9NVH1 559 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 PACSIN3Q9UKS6 424 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 H0Y3Z8 333 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 TAPBPO15533 448 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 PHGDHO43175 533 aaKnown RBP14.42□□□□□ -0.1
DDX55-202ENST00000354291 CD5LO43866 347 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 CLEC3AO75596 197 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 SOX30O94993 753 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 PAX1P15863 534 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 PLTPP55058 493 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 MTTPP55157 894 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 RAB10P61026 200 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 ETF1P62495 437 aaKnown RBP14.42□□□□□ -0.1
DDX55-202ENST00000354291 C2orf54Q08AI8 447 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 GAB1Q13480 694 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 ZKSCAN8Q15776 578 aaPredicted RBP14.42□□□□□ -0.1
DDX55-202ENST00000354291 TBCELQ5QJ74 424 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 TRIM40Q6P9F5 258 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 ZNF550Q7Z398 422 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 CTAGE3PQ8IX95 158 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 OR2L5Q8NG80 312 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 WNT2BQ93097 391 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 ANKRD9Q96BM1 317 aaPredicted RBP14.42□□□□□ -0.1
DDX55-202ENST00000354291 UBXN10Q96LJ8 280 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 RILPQ96NA2 401 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 DGAT2Q96PD7 388 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 CD274Q9NZQ7 290 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 C15orf41Q9Y2V0 281 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 HEATR5AQ86XA9 2040 aa14.42□□□□□ -0.1
DDX55-202ENST00000354291 IQANK1A0A1B0GTG1 560 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 ANKRD33BA6NCL7 494 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 TP53I11O14683 189 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 DYRK3O43781 588 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 SNX4O95219 450 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 S100BP04271 92 aaPredicted RBP14.41□□□□□ -0.1
DDX55-202ENST00000354291 HSPA7P48741 367 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 FBXW4P57775 412 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 GPX6P59796 221 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 LAPTM5Q13571 262 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 OR4D1Q15615 310 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 NTRK2Q16620 822 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 PDK4Q16654 411 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 HIST2H2ACQ16777 129 aaPredicted RBP14.41□□□□□ -0.1
DDX55-202ENST00000354291 KBTBD12Q3ZCT8 623 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 HIST2H2AA3Q6FI13 130 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 ABHD17CQ6PCB6 329 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 DGAT2L6Q6ZPD8 337 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 SLC29A4Q7RTT9 530 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 PDPRQ8NCN5 879 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 STAG3L4Q8TBR4 150 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 PTCD3Q96EY7 689 aaKnown RBP14.41□□□□□ -0.1
DDX55-202ENST00000354291 RBM18Q96H35 190 aaKnown RBP14.41□□□□□ -0.1
DDX55-202ENST00000354291 TMEM79Q9BSE2 394 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 EFCAB11Q9BUY7 163 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 PTBP2Q9UKA9 531 aaKnown RBP14.41□□□□□ -0.1
DDX55-202ENST00000354291 RNF112Q9ULX5 631 aa14.41□□□□□ -0.1
DDX55-202ENST00000354291 A8MV72 311 aaPredicted RBP14.4□□□□□ -0.1
DDX55-202ENST00000354291 GNB5O14775 395 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 MSTNO14793 375 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 ACTL6AO96019 429 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 IGKV3-11P04433 115 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 STX2P32856 288 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 GCKP35557 465 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 CD79BP40259 229 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 MAGEA4P43358 317 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 EEF1A1P68104 462 aaKnown RBP14.4□□□□□ -0.1
DDX55-202ENST00000354291 TGM3Q08188 693 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 DOC2AQ14183 400 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 ADPRMQ3LIE5 342 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 PAGE2BQ5JRK9 111 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 EEF1A1P5Q5VTE0 462 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 FNDC7Q5VTL7 733 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 ANKRD34AQ69YU3 496 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 RAPH1Q70E73 1250 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 BTLAQ7Z6A9 289 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 CCDC25Q86WR0 208 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 PPM1NQ8N819 430 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 FAM83FQ8NEG4 500 aaPredicted RBP14.4□□□□□ -0.1
DDX55-202ENST00000354291 FBXO25Q8TCJ0 367 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms