RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TDRD12Q587J7 1177 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ARHGEF16Q5VV41 709 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SNRNP48Q6IEG0 339 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 STEAP1BQ6NZ63 245 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 BLOC1S2Q6QNY1 142 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ADAMTSL5Q6ZMM2 481 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 KMT5CQ86Y97 462 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 EFCAB13Q8IY85 973 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 TEX26Q8N6G2 289 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OR6M1Q8NGM8 313 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 OR13C2Q8NGS9 318 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 M1APQ8TC57 530 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SLC26A7Q8TE54 656 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 APOBEC4Q8WW27 367 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 UHRF2Q96PU4 802 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 TTYH2Q9BSA4 534 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ALG12Q9BV10 488 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 FTHL17Q9BXU8 183 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 TCF7L2Q9NQB0 619 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 HYPKQ9NX55 129 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ELOVL5Q9NYP7 299 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF319Q9P2F9 582 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 EXTL2Q9UBQ6 330 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 ATP6V1HQ9UI12 483 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SLC6A5Q9Y345 797 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NME7Q9Y5B8 376 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.45□□□□□ -2.18
BRCA1-202ENST00000354071 KMT2EQ8IZD2 1858 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 FMN2Q9NZ56 1722 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 O00370 1275 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF208O43345 1280 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CIDEAO60543 219 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SDC3O75056 442 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KIAA0754O94854 1291 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CHRNA1P02708 482 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 LYNP07948 512 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 FGF4P08620 206 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CD48P09326 243 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GSTT2P0CG29 244 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GSTT2BP0CG30 244 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MAZP56270 477 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 RPL27P61353 136 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 IRX4P78413 519 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SPIBQ01892 262 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TGM3Q08188 693 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OR1C1Q15619 314 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TRIP6Q15654 476 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ALKBH6Q3KRA9 238 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SLC35D3Q5M8T2 416 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PHYHD1Q5SRE7 291 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 IRAK1BP1Q5VVH5 260 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC60Q8IWA6 550 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 DND1Q8IYX4 353 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CLEC4FQ8N1N0 589 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 LRRC43Q8N309 656 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SUMF1Q8NBK3 374 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CHDHQ8NE62 594 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OR5D13Q8NGL4 314 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 C16orf52Q8NHV5 167 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CHPT1Q8WUD6 406 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SORCS1Q8WY21 1168 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CTNNBL1Q8WYA6 563 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NCLNQ969V3 563 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CDCA5Q96FF9 252 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ADGRG7Q96K78 797 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 PANX1Q96RD7 426 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KRT12Q99456 494 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ATP13A3Q9H7F0 1226 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 UPF2Q9HAU5 1272 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ACOXLQ9NUZ1 547 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TBC1D13Q9NVG8 400 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 C1orf123Q9NWV4 160 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SLC7A7Q9UM01 511 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF175Q9Y473 711 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SPACA6W5XKT8 324 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 HTTP42858 3142 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MAGI2Q86UL8 1455 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CGNL1Q0VF96 1302 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 WDR81Q562E7 1941 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ARPC4-TTLL3A0A0A6YYG9 625 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 LMO7DNF2Z398 122 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 NUDT21O43809 227 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SRPX2O60687 465 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TSC22D2O75157 780 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 GRAP2O75791 330 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ANXA9O76027 345 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OAS1P00973 400 aaKnown RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OPN1LWP04000 364 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 CALB2P22676 271 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SOX3P41225 446 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SLC6A8P48029 635 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 OC90Q02509 493 aaPredicted RBP1.44□□□□□ -2.18
BRCA1-202ENST00000354071 TFDP1Q14186 410 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 MTF1Q14872 753 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 LRIT3Q3SXY7 679 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 WDR38Q5JTN6 314 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 SYT10Q6XYQ8 523 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 KDM7AQ6ZMT4 941 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 Q7L0L9 218 aa1.44□□□□□ -2.18
BRCA1-202ENST00000354071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms