RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RGNQ15493 299 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 ALG1LQ6GMV1 187 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 WDR77Q9BQA1 342 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 IFT46Q9NQC8 304 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 A0A1W2PQ72 361 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 HOXC11O43248 304 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 AQP9O43315 295 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 LDB3O75112 727 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 RHCEP18577 417 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 KCNAB2Q13303 367 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 SLC36A3Q495N2 470 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 ZSWIM9Q86XI8 627 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 PDLIM5Q96HC4 596 aaKnown RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 SLC45A3Q96JT2 553 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 B3GNT4Q9C0J1 378 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 UBE2ZQ9H832 354 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-201ENST00000353479 FANCFQ9NPI8 374 aa14.16□□□□□ -0.14
COL17A1-201ENST00000353479 C17orf105B2RV13 164 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 SERTAD2Q14140 314 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 C6orf132Q5T0Z8 1188 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 SLC27A4Q6P1M0 643 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 LINGO2Q7L985 606 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 OR51G2Q8NGK0 314 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 NME4O00746 187 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 INMTO95050 263 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 ADORA3P0DMS8 318 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 PTGER1P34995 402 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 XCR1P46094 333 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 CBX3Q13185 183 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 OR5T3Q8NGG3 340 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 OR6N2Q8NGY6 317 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 ANKRA2Q9H9E1 313 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 A0A0G2JPF8 293 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 C17orf113A0A1B0GUU1 675 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 HNRNPCL3B7ZW38 293 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 FAM227AF5H4B4 570 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 DHFRP00374 187 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 HNRNPCL4P0DMR1 293 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 NR0B1P51843 470 aaKnown RBP14.15□□□□□ -0.14
COL17A1-201ENST00000353479 MAZP56270 477 aaKnown RBP14.15□□□□□ -0.14
COL17A1-201ENST00000353479 ROR2Q01974 943 aaKnown RBP14.15□□□□□ -0.14
COL17A1-201ENST00000353479 E2F2Q14209 437 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 BTBD16Q32M84 506 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 MS4A4EQ96PG1 132 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 MYADMQ96S97 322 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 P04436 131 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 TGFBR2P37173 567 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 PAMR1Q6UXH9 720 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 OR2T33Q8NG76 320 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 ADAMTS19Q8TE59 1207 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 ASB15Q8WXK1 588 aa14.15□□□□□ -0.14
COL17A1-201ENST00000353479 FABP12A6NFH5 140 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 GSTM2P28161 218 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF423Q2M1K9 1284 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 CARD17Q5XLA6 110 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SLC7A6OSQ96CW6 309 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 C3orf30Q96M34 536 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 TNFRSF1BP20333 461 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 KLHL26Q53HC5 615 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 BICRALQ6AI39 1079 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF627Q7L945 461 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 FAM86B1Q8N7N1 296 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 TOR1AIP2Q8NFQ8 470 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 MUS81Q96NY9 551 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SLC30A3Q99726 388 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PHF7Q9BWX1 381 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 MTHFD2LQ9H903 347 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ASB6Q9NWX5 421 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 B4GALT3O60512 393 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 TSPAN5P62079 268 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 MVKQ03426 396 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 NLGN4XQ8N0W4 816 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PITHD1Q9GZP4 211 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PTBP2Q9UKA9 531 aaKnown RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 XIRP1Q702N8 1843 aaKnown RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ACOX3O15254 700 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PPM1BO75688 479 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SPARCP09486 303 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 FOLR3P41439 243 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 GPR4P46093 362 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 EMP2P54851 167 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 NADK2Q4G0N4 442 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 OTUD1Q5VV17 481 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 RASSF6Q6ZTQ3 369 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SDR16C5Q8N3Y7 309 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PNLDC1Q8NA58 520 aaKnown RBP14.14□□□□□ -0.15
COL17A1-201ENST00000353479 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 MSANTD3Q96H12 275 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 C2orf92A0A1B0GVN3 265 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 A0A1W2PRQ8 180 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 RAB36O95755 333 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 HTR1AP08908 422 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ELK4P28324 431 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 CDKL1Q00532 357 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SCN1BQ07699 218 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms