RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TEX10Q9NXF1 929 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 SNX7Q9UNH6 387 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 SPIN1Q9Y657 262 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 A0A1W2PQL4 384 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 C6P13671 934 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 SLC9A3P48764 834 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 WNT4P56705 351 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 REEP5Q00765 189 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 CDK10Q15131 360 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 HSDL2Q6YN16 418 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 NUDT13Q86X67 352 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 RDH10Q8IZV5 341 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 LINC00471Q8N535 108 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 NRTNQ99748 197 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 GPA33Q99795 319 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 MRPS18AQ9NVS2 196 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 FBXW2Q9UKT8 454 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 TCF20Q9UGU0 1960 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 LINC00854A0A1B0GVQ3 168 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 CENPXA8MT69 81 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 EPPINO95925 133 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 ACADMP11310 421 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 MRPS15P82914 257 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 MLC1Q15049 377 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 DEFB115Q30KQ5 88 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 TRIM60Q495X7 471 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 ENTPD8Q5MY95 495 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 C1orf94Q6P1W5 598 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 IQCHQ86VS3 1027 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 ASCC1Q8N9N2 400 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 OR5D16Q8NGK9 328 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 KIAA1143Q96AT1 154 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 ARRDC3Q96B67 414 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 DMRTB1Q96MA1 342 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 GDF15Q99988 308 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 FNDC11Q9BVV2 318 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 C11orf54Q9H0W9 315 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 CARD8Q9Y2G2 431 aa23.17■■□□□ 1.3
CPNE1-202ENST00000352393 YARS2Q9Y2Z4 477 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 SF3B6Q9Y3B4 125 aaKnown RBP23.17■■□□□ 1.3
CPNE1-202ENST00000352393 TMEM129A0AVI4 362 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 TFECO14948 347 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-202ENST00000352393 EPHX1P07099 455 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 RPS25P62851 125 aaKnown RBP23.16■■□□□ 1.3
CPNE1-202ENST00000352393 LSM11P83369 360 aaKnown RBP eCLIP23.16■■□□□ 1.3
CPNE1-202ENST00000352393 TLE2Q04725 743 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 DPTQ07507 201 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 PLK5Q496M5 336 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 SLC7A6Q92536 515 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 TM9SF4Q92544 642 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 TMEM203Q969S6 136 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 RNF170Q96K19 258 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 KCTD7Q96MP8 289 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 FGF20Q9NP95 211 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-202ENST00000352393 CKAP5Q14008 2032 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 NOTCH4Q99466 2003 aa23.16■■□□□ 1.3
CPNE1-202ENST00000352393 ABHD14A-ACY1A0A1B0GW23 586 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 FABP12A6NFH5 140 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 NDUFS4O43181 175 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 TSPAN19P0C672 248 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 MYL12AP19105 171 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 CXCR2P25025 360 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 KLHL22Q53GT1 634 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 ARHGAP15Q53QZ3 475 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 DDI2Q5TDH0 399 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 QSOX2Q6ZRP7 698 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 LAPTM4BQ86VI4 370 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 VWA5B2Q8N398 1253 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 DIRAS2Q96HU8 199 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 ISYNA1Q9NPH2 558 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 POLR1CO15160 346 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-202ENST00000352393 SCO2O43819 266 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 VEGFDO43915 354 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 CXCL14O95715 111 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 PRNPP04156 253 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 CISD3P0C7P0 127 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 ACP2P11117 423 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 SDC2P34741 201 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 TPBGQ13641 420 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 DUSP6Q16828 381 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 SLC35F1Q5T1Q4 408 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 KIF18BQ86Y91 864 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 GALNT12Q8IXK2 581 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 UCN3Q969E3 161 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 PRRC1Q96M27 445 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 SLC9A8Q9Y2E8 581 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 HCFC2Q9Y5Z7 792 aa23.15■■□□□ 1.3
CPNE1-202ENST00000352393 PDE4DIPQ5VU43 2346 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 FEZF1A0PJY2 475 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 ANKRD34BA5PLL1 514 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 CCDC182A6NF36 153 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 B4DXG7 233 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 NR2F6P10588 404 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 NR2F1P10589 423 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 SMSP52788 366 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 RAB40BQ12829 278 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 ARHGAP19Q14CB8 494 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 OR2G6Q5TZ20 316 aa23.14■■□□□ 1.3
CPNE1-202ENST00000352393 THOC7Q6I9Y2 204 aaKnown RBP23.14■■□□□ 1.3
CPNE1-202ENST00000352393 OLIG3Q7RTU3 272 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms