RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TPRG1LQ5T0D9 272 aa13□□□□□ -0.33
SMC6-201ENST00000351948 CLEC14AQ86T13 490 aa13□□□□□ -0.33
SMC6-201ENST00000351948 OR52N2Q8NGI0 321 aa13□□□□□ -0.33
SMC6-201ENST00000351948 OR51G2Q8NGK0 314 aa13□□□□□ -0.33
SMC6-201ENST00000351948 UFD1Q92890 307 aa13□□□□□ -0.33
SMC6-201ENST00000351948 PIP5K1AQ99755 562 aa13□□□□□ -0.33
SMC6-201ENST00000351948 CCM2LQ9NUG4 571 aaPredicted RBP13□□□□□ -0.33
SMC6-201ENST00000351948 IL37Q9NZH6 218 aa13□□□□□ -0.33
SMC6-201ENST00000351948 DOCK5Q9H7D0 1870 aa13□□□□□ -0.33
SMC6-201ENST00000351948 ZNF99A8MXY4 864 aaPredicted RBP13□□□□□ -0.33
SMC6-201ENST00000351948 PEPDP12955 493 aa13□□□□□ -0.33
SMC6-201ENST00000351948 RBBP4Q09028 425 aa13□□□□□ -0.33
SMC6-201ENST00000351948 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
SMC6-201ENST00000351948 KIAA1614Q5VZ46 1190 aa13□□□□□ -0.33
SMC6-201ENST00000351948 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
SMC6-201ENST00000351948 TMED9Q9BVK6 235 aa13□□□□□ -0.33
SMC6-201ENST00000351948 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
SMC6-201ENST00000351948 CD320Q9NPF0 282 aa13□□□□□ -0.33
SMC6-201ENST00000351948 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 EMP2P54851 167 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PMS2P3Q13401 168 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 ADAMTSL4Q6UY14 1074 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 VWA5B2Q8N398 1253 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PALMDQ9NP74 551 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PADI2Q9Y2J8 665 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 C17orf113A0A1B0GUU1 675 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 HYKKA2RU49 373 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 UBFD1O14562 309 aaKnown RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 ADORA3P0DMS8 318 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 CLCN2P51788 898 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 OR12D2P58182 307 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 SNTA1Q13424 505 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PIN1Q13526 163 aaPredicted RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 UGT3A2Q3SY77 523 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PIGGQ5H8A4 983 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 NUDT8Q8WV74 236 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 ERMAPQ96PL5 475 aaPredicted RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 MAP3K3Q99759 626 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 PLA2G2FQ9BZM2 168 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 GPR45Q9Y5Y3 372 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 OPN1LWP04000 364 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 HTRA4P83105 476 aaPredicted RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 OR5M10Q6IEU7 315 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 MAFAQ8NHW3 353 aaPredicted RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 PROKR1Q8TCW9 393 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 C1QTNF1Q9BXJ1 281 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 TBC1D29Q9UFV1 150 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 H7C0S8 307 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 SOCS2O14508 198 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 TFF2Q03403 129 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 FCHO2Q0JRZ9 810 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 BLMHQ13867 455 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 YIPF7Q8N8F6 280 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 IL17RCQ8NAC3 791 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 OR2T11Q8NH01 316 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 CTRCQ99895 268 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 GPC6Q9Y625 555 aaPredicted RBP12.99□□□□□ -0.33
SMC6-201ENST00000351948 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
SMC6-201ENST00000351948 ANXA2P2A6NMY6 339 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 CLEC3AO75596 197 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 ANXA2P07355 339 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 GKN3PP0CG01 181 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 PPP3R1P63098 170 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 TXNL4AP83876 142 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 RGS21Q2M5E4 152 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 BHLHA9Q7RTU4 235 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 TM9SF2Q99805 663 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 MAPKAP1Q9BPZ7 522 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 WDR77Q9BQA1 342 aaPredicted RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 SOBPA7XYQ1 873 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 MITFO75030 526 aaPredicted RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 DBIP07108 87 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 GRPRP30550 384 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 ATP6AP1Q15904 470 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 CARTPTQ16568 116 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 DCP2Q8IU60 420 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 SLC37A2Q8TED4 501 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 HTRA1Q92743 480 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 CNDP2Q96KP4 475 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 FEVQ99581 238 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 ACTRT3Q9BYD9 372 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 TCF7L1Q9HCS4 588 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 GMPR2Q9P2T1 348 aaKnown RBP12.98□□□□□ -0.33
SMC6-201ENST00000351948 MAN2B2Q9Y2E5 1009 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 GGT1P19440 569 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 EDNRAP25101 427 aa12.98□□□□□ -0.33
SMC6-201ENST00000351948 EIF2DP41214 584 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms