RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 LGI4Q8N135 537 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 CA13Q8N1Q1 262 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 PIK3C3Q8NEB9 887 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 ERVMER34-1Q9H9K5 563 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 ANKHQ9HCJ1 492 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 FAM32AQ9Y421 112 aaKnown RBP17.38■□□□□ 0.37
TRIM41-202ENST00000351937 TESMINQ9Y4I5 508 aa17.38■□□□□ 0.37
TRIM41-202ENST00000351937 GPC6Q9Y625 555 aaPredicted RBP17.38■□□□□ 0.37
TRIM41-202ENST00000351937 TNFRSF11BO00300 401 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 CYR61O00622 381 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 JRKO75564 520 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 IFNW1P05000 195 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 CPMP14384 443 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 CDH2P19022 906 aaPredicted RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 LTB4RQ15722 352 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PRTGQ2VWP7 1150 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 DEFB110Q30KQ9 67 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 CYP27C1Q4G0S4 372 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 FAHD1Q6P587 224 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 FAM92BQ6ZTR7 304 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 C8orf59Q8N0T1 100 aaPredicted RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 BBS10Q8TAM1 723 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 APOBEC4Q8WW27 367 aaKnown RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PROX1Q92786 737 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 KAT2AQ92830 837 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 C16orf58Q96GQ5 468 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PIP5K1AQ99755 562 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 RAB33BQ9H082 229 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 ENPP4Q9Y6X5 453 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 LOC100130705A0A1B0GUX0 176 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 TRIM64A6NGJ6 449 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 RHPN2P1A8MT19 583 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 ITGAMP11215 1152 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PORP16435 677 aaPredicted RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 RHCEP18577 417 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PIGAP37287 484 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 DYNC1I2Q13409 638 aaKnown RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PRAMEF8Q5VWM4 474 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PRAMEF7Q5VXH5 474 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 THAP5Q7Z6K1 395 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 OR5T3Q8NGG3 340 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 MAFAQ8NHW3 353 aaPredicted RBP17.37■□□□□ 0.37
TRIM41-202ENST00000351937 TANKQ92844 425 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 COL26A1Q96A83 441 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 COL21A1Q96P44 957 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 YIPF4Q9BSR8 244 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 SPATA5L1Q9BVQ7 753 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 KIF17Q9P2E2 1029 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 SEC14L3Q9UDX4 400 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 EML5Q05BV3 1969 aa17.37■□□□□ 0.37
TRIM41-202ENST00000351937 PCSK6P29122 969 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 SLC5A2P31639 672 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 KCNJ5P48544 419 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 TUBA4AP68366 448 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 IL18R1Q13478 541 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 PUM1Q14671 1186 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM41-202ENST00000351937 OR4N5Q8IXE1 308 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 ATG16L2Q8NAA4 619 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 GPR32P1Q8NGA4 272 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 BTBD2Q9BX70 525 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 ACTRT3Q9BYD9 372 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 DDX18Q9NVP1 670 aaKnown RBP17.36■□□□□ 0.37
TRIM41-202ENST00000351937 PTGFRNQ9P2B2 879 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 EPHA6Q9UF33 1036 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 CSNK1G3Q9Y6M4 447 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 hCG_2014768A0A024R1R8 64 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 RECKO95980 971 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 MAN2A2P49641 1150 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 SPIBQ01892 262 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
TRIM41-202ENST00000351937 OR2L13Q8N349 312 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 OR7G2Q8NG99 324 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 OR4C15Q8NGM1 316 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 GIMAP5Q96F15 307 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 ZNF354BQ96LW1 612 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 OR7D2Q96RA2 312 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 CHRNA10Q9GZZ6 450 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 ING2Q9H160 280 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 TUBA8Q9NY65 449 aaPredicted RBP17.36■□□□□ 0.37
TRIM41-202ENST00000351937 LIPT1Q9Y234 373 aa17.36■□□□□ 0.37
TRIM41-202ENST00000351937 SPAG17Q6Q759 2223 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 A0A0G2JPF8 293 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 TLCD2A6NGC4 264 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 HNRNPCL2B2RXH8 293 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 HNRNPCL3B7ZW38 293 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 SGK494L7N484 410 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 UGT2B11O75310 529 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 BMP10O95393 424 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 GPR75O95800 540 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 HNRNPCL4P0DMR1 293 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 YAP1P46937 504 aaKnown RBP17.35■□□□□ 0.37
TRIM41-202ENST00000351937 HMGA2P52926 109 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 RAB38P57729 211 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 SKP1P63208 163 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 SHC2P98077 582 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 NIPAL1Q6NVV3 410 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 GALNT5Q7Z7M9 940 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 GIPC3Q8TF64 312 aa17.35■□□□□ 0.37
TRIM41-202ENST00000351937 ZDHHC12Q96GR4 267 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms