RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 A8MVJ9 347 aa16.89■□□□□ 0.29
APP-202ENST00000348990 RFPL3O75679 317 aa16.89■□□□□ 0.29
APP-202ENST00000348990 DHFRP00374 187 aa16.89■□□□□ 0.29
APP-202ENST00000348990 IMPA1P29218 277 aa16.89■□□□□ 0.29
APP-202ENST00000348990 ETV3P41162 512 aa16.89■□□□□ 0.29
APP-202ENST00000348990 CTSCP53634 463 aa16.89■□□□□ 0.29
APP-202ENST00000348990 MPPE1Q53F39 396 aa16.89■□□□□ 0.29
APP-202ENST00000348990 ZNF770Q6IQ21 691 aaPredicted RBP16.89■□□□□ 0.29
APP-202ENST00000348990 OR4F15Q8NGB8 312 aa16.89■□□□□ 0.29
APP-202ENST00000348990 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.89■□□□□ 0.29
APP-202ENST00000348990 CLEC4MQ9H2X3 399 aaPredicted RBP16.89■□□□□ 0.29
APP-202ENST00000348990 NUDT15Q9NV35 164 aa16.89■□□□□ 0.29
APP-202ENST00000348990 NKIRAS2Q9NYR9 191 aa16.89■□□□□ 0.29
APP-202ENST00000348990 A0A0G2JN53 185 aa16.88■□□□□ 0.29
APP-202ENST00000348990 SLC16A5O15375 505 aa16.88■□□□□ 0.29
APP-202ENST00000348990 RECQLP46063 649 aaPredicted RBP16.88■□□□□ 0.29
APP-202ENST00000348990 MTNR1AP48039 350 aa16.88■□□□□ 0.29
APP-202ENST00000348990 LIMS1P48059 325 aa16.88■□□□□ 0.29
APP-202ENST00000348990 TBPL1P62380 186 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ADAM15Q13444 863 aa16.88■□□□□ 0.29
APP-202ENST00000348990 TNK1Q13470 666 aa16.88■□□□□ 0.29
APP-202ENST00000348990 SF3A2Q15428 464 aaKnown RBP16.88■□□□□ 0.29
APP-202ENST00000348990 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
APP-202ENST00000348990 OR4M2Q8NGB6 313 aa16.88■□□□□ 0.29
APP-202ENST00000348990 LINC01599Q8WXQ3 324 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ZNF607Q96SK3 696 aa16.88■□□□□ 0.29
APP-202ENST00000348990 TBX5Q99593 518 aa16.88■□□□□ 0.29
APP-202ENST00000348990 KLHL1Q9NR64 748 aa16.88■□□□□ 0.29
APP-202ENST00000348990 TAS2R7Q9NYW3 318 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ZFR2Q9UPR6 939 aaKnown RBP16.88■□□□□ 0.29
APP-202ENST00000348990 EEF1E1O43324 174 aaKnown RBP16.88■□□□□ 0.29
APP-202ENST00000348990 PAHP00439 452 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ZNF81P51508 661 aa16.88■□□□□ 0.29
APP-202ENST00000348990 CLDN20P56880 219 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ARHGEF6Q15052 776 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ANGPT1Q15389 498 aa16.88■□□□□ 0.29
APP-202ENST00000348990 SPOUT1Q5T280 376 aaKnown RBP16.88■□□□□ 0.29
APP-202ENST00000348990 TRMT11Q7Z4G4 463 aaKnown RBP16.88■□□□□ 0.29
APP-202ENST00000348990 LSRQ86X29 649 aaPredicted RBP16.88■□□□□ 0.29
APP-202ENST00000348990 C2orf69Q8N8R5 385 aa16.88■□□□□ 0.29
APP-202ENST00000348990 GALNT6Q8NCL4 622 aa16.88■□□□□ 0.29
APP-202ENST00000348990 GPR32P1Q8NGA4 272 aa16.88■□□□□ 0.29
APP-202ENST00000348990 DNAJA4Q8WW22 397 aaPredicted RBP16.88■□□□□ 0.29
APP-202ENST00000348990 TMEM43Q9BTV4 400 aa16.88■□□□□ 0.29
APP-202ENST00000348990 CDCP1Q9H5V8 836 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ZC4H2Q9NQZ6 224 aa16.88■□□□□ 0.29
APP-202ENST00000348990 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
APP-202ENST00000348990 CKBP12277 381 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ZNF250P15622 560 aa16.88■□□□□ 0.29
APP-202ENST00000348990 PCDH1Q08174 1060 aa16.88■□□□□ 0.29
APP-202ENST00000348990 Q6ZVU0 165 aa16.88■□□□□ 0.29
APP-202ENST00000348990 BEST4Q8NFU0 473 aa16.88■□□□□ 0.29
APP-202ENST00000348990 C12orf4Q9NQ89 552 aa16.88■□□□□ 0.29
APP-202ENST00000348990 ENAMQ9NRM1 1142 aa16.88■□□□□ 0.29
APP-202ENST00000348990 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
APP-202ENST00000348990 PCDHGB7Q9Y5F8 929 aa16.88■□□□□ 0.29
APP-202ENST00000348990 SEPT4O43236 478 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SLC43A1O75387 559 aa16.87■□□□□ 0.29
APP-202ENST00000348990 LGI1O95970 557 aa16.87■□□□□ 0.29
APP-202ENST00000348990 URODP06132 367 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SYPP08247 313 aa16.87■□□□□ 0.29
APP-202ENST00000348990 MMP11P24347 488 aa16.87■□□□□ 0.29
APP-202ENST00000348990 RPL3P39023 403 aaKnown RBP16.87■□□□□ 0.29
APP-202ENST00000348990 EVX1P49640 407 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SMIM11AP58511 58 aa16.87■□□□□ 0.29
APP-202ENST00000348990 RAB14P61106 215 aa16.87■□□□□ 0.29
APP-202ENST00000348990 CFAP206Q8IYR0 622 aa16.87■□□□□ 0.29
APP-202ENST00000348990 DCLRE1CQ96SD1 692 aaKnown RBP16.87■□□□□ 0.29
APP-202ENST00000348990 ARHGAP39Q9C0H5 1083 aa16.87■□□□□ 0.29
APP-202ENST00000348990 ABCG4Q9H172 646 aa16.87■□□□□ 0.29
APP-202ENST00000348990 H2AFY2Q9P0M6 372 aaPredicted RBP16.87■□□□□ 0.29
APP-202ENST00000348990 LSM7Q9UK45 103 aaKnown RBP16.87■□□□□ 0.29
APP-202ENST00000348990 SH2B3Q9UQQ2 575 aa16.87■□□□□ 0.29
APP-202ENST00000348990 NPIPB8E9PQR5 432 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SLC22A5O76082 557 aa16.87■□□□□ 0.29
APP-202ENST00000348990 UQCRC2P22695 453 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SMSP52788 366 aa16.87■□□□□ 0.29
APP-202ENST00000348990 PRSS53Q2L4Q9 553 aa16.87■□□□□ 0.29
APP-202ENST00000348990 KLHL12Q53G59 568 aa16.87■□□□□ 0.29
APP-202ENST00000348990 C12orf73Q69YU5 71 aa16.87■□□□□ 0.29
APP-202ENST00000348990 TMEM220Q6QAJ8 160 aa16.87■□□□□ 0.29
APP-202ENST00000348990 ZNF783Q6ZMS7 281 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SLCO4C1Q6ZQN7 724 aa16.87■□□□□ 0.29
APP-202ENST00000348990 CMTM8Q8IZV2 173 aa16.87■□□□□ 0.29
APP-202ENST00000348990 CHST14Q8NCH0 376 aa16.87■□□□□ 0.29
APP-202ENST00000348990 OR5D16Q8NGK9 328 aa16.87■□□□□ 0.29
APP-202ENST00000348990 TMEM163Q8TC26 289 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SMG7Q92540 1137 aaKnown RBP16.87■□□□□ 0.29
APP-202ENST00000348990 C11orf24Q96F05 449 aaPredicted RBP16.87■□□□□ 0.29
APP-202ENST00000348990 SERHL2Q9H4I8 314 aa16.87■□□□□ 0.29
APP-202ENST00000348990 SLC13A4Q9UKG4 626 aa16.87■□□□□ 0.29
APP-202ENST00000348990 GTPBP1O00178 669 aaKnown RBP16.86■□□□□ 0.29
APP-202ENST00000348990 OR12D1P0DN82 309 aa16.86■□□□□ 0.29
APP-202ENST00000348990 HMGA1P17096 107 aaKnown RBP16.86■□□□□ 0.29
APP-202ENST00000348990 SLC16A1P53985 500 aa16.86■□□□□ 0.29
APP-202ENST00000348990 ATP12AP54707 1039 aa16.86■□□□□ 0.29
APP-202ENST00000348990 CDH11P55287 796 aa16.86■□□□□ 0.29
APP-202ENST00000348990 PCBP3P57721 371 aaKnown RBP16.86■□□□□ 0.29
APP-202ENST00000348990 SYPL1Q16563 259 aa16.86■□□□□ 0.29
APP-202ENST00000348990 PLEKHM3Q6ZWE6 761 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms