RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CXorf51AA0A1B0GTR3 108 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TMEM129A0AVI4 362 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC22A23A1A5C7 686 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PIPSLA2A3N6 862 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF98A6NK75 572 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HEPACAM2A8MVW5 462 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PCDH7O60245 1069 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 NBNO60934 754 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 LDOC1O95751 146 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TRBC1P01850 177 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HIST1H2AGP0C0S8 130 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 NR2F6P10588 404 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 JUPP14923 745 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HIST1H2ADP20671 130 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 C4BPBP20851 252 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ITPKAP23677 461 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 RAG2P55895 527 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CTBP2P56545 445 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CYP4F8P98187 520 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CAMK1Q14012 370 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CLLU1OSQ5K130 101 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZDHHC20Q5W0Z9 365 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 RGS7BPQ6MZT1 257 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 BHLHB9Q6PI77 547 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CASP12Q6UXS9 341 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CHMP1BQ7LBR1 199 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ACOT12Q8WYK0 555 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 RFT1Q96AA3 541 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CXorf40BQ96DE9 158 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CHFRQ96EP1 664 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 AHCYL2Q96HN2 611 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HIST1H2AHQ96KK5 128 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 LYSMD1Q96S90 227 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HIST1H2AJQ99878 128 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 USB1Q9BQ65 265 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TCF25Q9BQ70 676 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 H2AFJQ9BTM1 129 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 DUSP26Q9BV47 211 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 BOCQ9BWV1 1114 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 RBCK1Q9BYM8 510 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF436Q9C0F3 470 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ABCG8Q9H221 673 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 DPAGT1Q9H3H5 408 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 DNAJC11Q9NVH1 559 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZSCAN32Q9NX65 697 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZDHHC3Q9NYG2 299 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF282Q9UDV7 671 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 FNDC3AQ9Y2H6 1198 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PRSS21Q9Y6M0 314 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ARPC4-TTLL3A0A0A6YYG9 625 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TEX13CA0A0J9YWL9 993 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 GPR171O14626 319 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PRKYO43930 277 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 STC2O76061 302 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TGM6O95932 706 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PAHP00439 452 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 IFNA14P01570 189 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 SRPRAP08240 638 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 LAMP1P11279 417 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CORO1AP31146 461 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 MMP12P39900 470 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 DCDC1P59894 354 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 GAB1Q13480 694 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF169Q14929 603 aaPredicted RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CDKN3Q16667 212 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 CRB2Q5IJ48 1285 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 FGD2Q7Z6J4 655 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 DCAF4L2Q8NA75 395 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 HUS1BQ8NHY5 278 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 COQ10AQ96MF6 247 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 FOPNLQ96NB1 174 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 EBPLQ9BY08 206 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 ABCG5Q9H222 651 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TMEM38AQ9H6F2 299 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 NUDT15Q9NV35 164 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 MRPS18AQ9NVS2 196 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 TRPM5Q9NZQ8 1165 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 COPS3Q9UNS2 423 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 MGAT4BQ9UQ53 548 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 PCDHB7Q9Y5E2 793 aa9.79□□□□□ -0.84
CHRNA1-202ENST00000348749 IGLV3-16A0A075B6K0 115 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 ABCD4O14678 606 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 SCAMP2O15127 329 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 SNAPC5O75971 98 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 VNN2O95498 520 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 HMGN1P05114 100 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 PEPDP12955 493 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 AHCYP23526 432 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 FEN1P39748 380 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 MVDP53602 400 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 GAS1P54826 345 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 ZXDBP98169 803 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 EEF1A2Q05639 463 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 SCARB2Q14108 478 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 GNA13Q14344 377 aa9.78□□□□□ -0.84
CHRNA1-202ENST00000348749 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms