RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ATF6P18850 670 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 TNFSF8P32971 234 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 ARFIP1P53367 373 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 CST6Q15828 149 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 PARGQ86W56 976 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 ZFP41Q8N8Y5 198 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 TSEN15Q8WW01 171 aaKnown RBP14.02□□□□□ -0.16
NUP50-201ENST00000347635 WDR92Q96MX6 357 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 SECISBP2Q96T21 854 aaKnown RBP14.02□□□□□ -0.16
NUP50-201ENST00000347635 MCHR1Q99705 422 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 BAIAP2Q9UQB8 552 aa14.02□□□□□ -0.16
NUP50-201ENST00000347635 LRRC37AA6NMS7 1700 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 A8MU76 341 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 ABLIM3O94929 683 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 BTN3A2P78410 334 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 BCL7AQ4VC05 210 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 ABHD13Q7L211 337 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 HMGN2P46Q86SG4 172 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 LYSMD2Q8IV50 215 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 FANK1Q8TC84 345 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 ZFR2Q9UPR6 939 aaKnown RBP14.02□□□□□ -0.17
NUP50-201ENST00000347635 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 COL11A2P13942 1736 aaPredicted RBP14.02□□□□□ -0.17
NUP50-201ENST00000347635 CD8B2A6NJW9 211 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 TTC34A8MYJ7 566 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 TSPAN4O14817 238 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 ANKRD28O15084 1053 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 SLC25A12O75746 678 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 CD8BP10966 210 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 CEBPBP17676 345 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 PTGS2P35354 604 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 MTNR1AP48039 350 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 NTHL1P78549 312 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 SLC46A3Q7Z3Q1 461 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 OR2T33Q8NG76 320 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 OR2M4Q96R27 311 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 P2RY12Q9H244 342 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 CORINQ9Y5Q5 1042 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 HCFC2Q9Y5Z7 792 aa14.02□□□□□ -0.17
NUP50-201ENST00000347635 PLD2O14939 933 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 SCAMP1O15126 338 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 EDNRAP25101 427 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ELOCQ15369 112 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 FAM219BQ5XKK7 198 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 NOXA1Q86UR1 476 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 TMEM145Q8NBT3 493 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 OR4K5Q8NGD3 323 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 IL17FQ96PD4 163 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 SLC46A2Q9BY10 475 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CPEB1Q9BZB8 566 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 DMRT3Q9NQL9 472 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 POLR1DQ9Y2S0 133 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ASB1Q9Y576 335 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ANXA2P2A6NMY6 339 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ZNF879B4DU55 563 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CFIP05156 583 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ANXA2P07355 339 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 BMP8BP34820 402 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 WNT4P56705 351 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ELOAQ14241 798 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 BMP8AQ7Z5Y6 402 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 RTN4RL1Q86UN2 441 aaPredicted RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 LACC1Q8IV20 430 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 NUFIP1Q9UHK0 495 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 STON1Q9Y6Q2 735 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 HMX3A6NHT5 357 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 RTCAO00442 366 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 PCDH17O14917 1159 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 RNGTTO60942 597 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 RGS9O75916 674 aaPredicted RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 ATF4P18848 351 aaPredicted RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 PUS10Q3MIT2 529 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 LRIF1Q5T3J3 769 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 OR52E4Q8NGH9 312 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 NEIL2Q969S2 332 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 HDHD5Q9BXW7 423 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 OBP2AQ9NY56 170 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 NLKQ9UBE8 527 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CITO14578 2027 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 A0A1B0GTL3 188 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 MEIOCA2RUB1 952 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 METTL15A6NJ78 407 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CTDSP2O14595 271 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 EEF1E1O43324 174 aaKnown RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 PRKYO43930 277 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 SGSHP51688 502 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 SLC35A2P78381 396 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 UAP1L1Q3KQV9 507 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 FAM180BQ6P0A1 224 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CHST14Q8NCH0 376 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 FOXJ1Q92949 421 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 NXPE3Q969Y0 559 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 RANBP3Q9H6Z4 567 aaPredicted RBP14.01□□□□□ -0.17
NUP50-201ENST00000347635 LTB4R2Q9NPC1 389 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 CKLFQ9UBR5 152 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 ZNF69Q9UC07 566 aa14.01□□□□□ -0.17
NUP50-201ENST00000347635 C12orf71A8MTZ7 269 aa14□□□□□ -0.17
NUP50-201ENST00000347635 J3KTA2 159 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms