RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IL23AQ9NPF7 189 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 MIEF1Q9NQG6 463 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 DNMT3AQ9Y6K1 912 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 TRBV23OR9-2A0A075B6M9 112 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 ZC3H12DA2A288 527 aaKnown RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 RHCEP18577 417 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 PTX3P26022 381 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 MAT2AP31153 395 aaKnown RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 UGT2B10P36537 528 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 NNMTP40261 264 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 RFX2P48378 723 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 UGT2B15P54855 530 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 RAB8AP61006 207 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 ELP6Q0PNE2 266 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 SF3B4Q15427 424 aaKnown RBP eCLIP5.7□□□□□ -1.59e-6■■□□□ 14.4
CLCN3-201ENST00000347613 NDUFAF5Q5TEU4 345 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 PLAG1Q6DJT9 500 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 LCTLQ6UWM7 567 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 VITQ6UXI7 678 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 SZRD1Q7Z422 152 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 AMZ2Q86W34 360 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 VRK2Q86Y07 508 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 ARMC8Q8IUR7 673 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 FAM9CQ8IZT9 166 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 KCT2Q8NC54 265 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 SP7Q8TDD2 431 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 GPR151Q8TDV0 419 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 GEMIN6Q8WXD5 167 aaKnown RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 CDCA4Q9BXL8 241 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 MKRN2Q9H000 416 aaKnown RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 PRDM7Q9NQW5 492 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 CNIH4Q9P003 139 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 TBC1D14Q9P2M4 693 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 APOBEC3BQ9UH17 382 aaKnown RBP5.7□□□□□ -1.5
CLCN3-201ENST00000347613 V9GYH0 126 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 EML5Q05BV3 1969 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 FANCMQ8IYD8 2048 aa5.7□□□□□ -1.5
CLCN3-201ENST00000347613 C17orf113A0A1B0GUU1 675 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 A0A1W2PP55 124 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 EPOPA6NHQ4 379 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 A8MV72 311 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TLX2O43763 284 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ANXA8P13928 327 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CCT3P49368 545 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TPTEP56180 551 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TARDBPQ13148 414 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF630Q2M218 657 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LRIT3Q3SXY7 679 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM52BQ4KMG9 183 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LIPKQ5VXJ0 399 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 C12orf73Q69YU5 71 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM107Q6UX40 140 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 DENND6BQ8NEG7 585 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TMIEQ8NEW7 156 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 BBS1Q8NFJ9 593 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 SMPDL3AQ92484 453 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ARMC5Q96C12 935 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 METTL2AQ96IZ6 378 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 DHRS1Q96LJ7 313 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF649Q9BS31 505 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 SPATA9Q9BWV2 254 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 WDR12Q9GZL7 423 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 KLHL25Q9H0H3 589 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 MIXL1Q9H2W2 232 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 DPEP2Q9H4A9 486 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 C11orf49Q9H6J7 331 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 A4GALTQ9NPC4 353 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 FBXO34Q9NWN3 711 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TVP23BQ9NYZ1 205 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ACAD8Q9UKU7 415 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GPR34Q9UPC5 381 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ASB4Q9Y574 426 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LINC00854A0A1B0GVQ3 168 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TLR4O00206 839 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PSMD11O00231 422 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LINC01565O15544 149 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 HRO43593 1189 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 HCRTR1O43613 425 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PRICKLE3O43900 615 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PIP5K1CO60331 668 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 OR10H3O60404 316 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IFNW1P05000 195 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 RPLP0P05388 317 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CERS1P27544 350 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TNFSF8P32971 234 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PBX2P40425 430 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 SEC13P55735 322 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF91Q05481 1191 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ELAVL3Q14576 367 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IRF4Q15306 451 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TRIM40Q6P9F5 258 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CCDC190Q86UF4 302 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LRRTM4Q86VH4 590 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 OR4N5Q8IXE1 308 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 UBE2J2Q8N2K1 259 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TBC1D19Q8N5T2 526 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 KAT2AQ92830 837 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CXorf40BQ96DE9 158 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TM9SF2Q99805 663 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 WASH6PQ9NQA3 447 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms