RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 Q6ZVL8 140 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 OLIG3Q7RTU3 272 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 TIGD4Q8IY51 512 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 FAM26EQ8N5C1 309 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 OR56A3Q8NH54 315 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 TTC9Q92623 222 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 PDXPQ96GD0 296 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 GPA33Q99795 319 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 MIEF1Q9NQG6 463 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 SHISA3A0PJX4 238 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 NPC1O15118 1278 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 CKMP06732 381 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 AGFG1P52594 562 aaKnown RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 SNRPD1P62314 119 aaKnown RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 ALDH6A1Q02252 535 aaKnown RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 LHFPL3Q86UP9 236 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 RASGRP3Q8IV61 690 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 RAET1EQ8TD07 263 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 SLC9A6Q92581 669 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 ZC3HAV1LQ96H79 300 aaKnown RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 MARVELD1Q9BSK0 173 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 MED18Q9BUE0 208 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 TMED9Q9BVK6 235 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
VHL-202ENST00000345392 TBC1D17Q9HA65 648 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 C5AR2Q9P296 337 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 GSTK1Q9Y2Q3 226 aa16.84■□□□□ 0.29
VHL-202ENST00000345392 INMT-MINDY4F8WBC2 141 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 HLA-DQB1P01920 261 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 CATP04040 527 aaKnown RBP16.83■□□□□ 0.29
VHL-202ENST00000345392 MMP11P24347 488 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 GIPRP48546 466 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 PODNL1Q6PEZ8 512 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 COMTD1Q86VU5 262 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 CMTM8Q8IZV2 173 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 TMEM163Q8TC26 289 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 ECHDC3Q96DC8 303 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 ATF6BQ99941 703 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 SOSTQ9BQB4 213 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 TMEM43Q9BTV4 400 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 ABCG4Q9H172 646 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 DMRT3Q9NQL9 472 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 ZSCAN32Q9NX65 697 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.29
VHL-202ENST00000345392 M0R3H8 397 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 ORC5O43913 435 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 LALBAP00709 142 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 EPHX1P07099 455 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 ETV3P41162 512 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 EVX1P49640 407 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 TBPL1P62380 186 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 POM121L1PQ3SYA9 428 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 HSD11B1LQ7Z5J1 315 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 ZER1Q7Z7L7 766 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 CHST14Q8NCH0 376 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 ZNF480Q8WV37 535 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 UFD1Q92890 307 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 RNFT2Q96EX2 444 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 POLDIP3Q9BY77 421 aaKnown RBP16.83■□□□□ 0.28
VHL-202ENST00000345392 SLAMF7Q9NQ25 335 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 CFAP97Q9P2B7 532 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 SRRDQ9UH36 339 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 KIAA1671Q9BY89 1806 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 STK25O00506 426 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 FABP7O15540 132 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 TRIM3O75382 744 aaPredicted RBP16.83■□□□□ 0.28
VHL-202ENST00000345392 NPPBP16860 134 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 UQCRC2P22695 453 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 GAS1P54826 345 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 TLE2Q04725 743 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 FAM205BPQ63HN1 556 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 FAM92BQ6ZTR7 304 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 SPERTQ8NA61 448 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 OR4M2Q8NGB6 313 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 CCDC120Q96HB5 630 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 PLA2G12AQ9BZM1 189 aa16.83■□□□□ 0.28
VHL-202ENST00000345392 C2orf92A0A1B0GVN3 265 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 ANHXE9PGG2 379 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
VHL-202ENST00000345392 PQBP1O60828 265 aaKnown RBP16.82■□□□□ 0.28
VHL-202ENST00000345392 PRKACBP22694 351 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 TPBGQ13641 420 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 TOR2AQ5JU69 321 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 AKAP1Q92667 903 aaKnown RBP eCLIP16.82■□□□□ 0.284e-19■■■■■ 28.9
VHL-202ENST00000345392 PHF21AQ96BD5 680 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 IGSF21Q96ID5 467 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 TEFMQ96QE5 360 aaKnown RBP16.82■□□□□ 0.28
VHL-202ENST00000345392 MYNNQ9NPC7 610 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 COQ3Q9NZJ6 369 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 FBXW2Q9UKT8 454 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 PIPSLA2A3N6 862 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 HSPB3Q12988 150 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 ASB18Q6ZVZ8 466 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 IQCHQ86VS3 1027 aa16.82■□□□□ 0.28
VHL-202ENST00000345392 LSRQ86X29 649 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms