RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 FOXM1Q08050 763 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 FAM53BQ14153 422 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SF3A2Q15428 464 aaKnown RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SMN1Q16637 294 aaKnown RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 FRMPD2BQ6IN97 320 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 CHERPQ8IWX8 916 aaKnown RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 ACOT4Q8N9L9 421 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 OR8J2Q8NGG1 315 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 ADAMTS18Q8TE60 1221 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 TANKQ92844 425 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 RAB8BQ92930 207 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 UCN3Q969E3 161 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SMIM10Q96HG1 83 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 BHLHE41Q9C0J9 482 aaPredicted RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 FAM60AQ9NP50 221 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 POLE4Q9NR33 117 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 EHD3Q9NZN3 535 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 AKAP7Q9P0M2 348 aaPredicted RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 PSME2Q9UL46 239 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 AP3M1Q9Y2T2 418 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 TESMINQ9Y4I5 508 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 LOC105369274A0A096LPK9 316 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 LOC102723532A0A0G2JNH3 316 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 BLACEA4D250 179 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 H6PDO95479 791 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 ZNF888P0CJ79 500 aaPredicted RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 MYF5P13349 255 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 HNRNPFP52597 415 aaKnown RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 ARSFP54793 590 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 MLLT10P55197 1068 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 TAS2R50P59544 299 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 PMS2P3Q13401 168 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SF3B4Q15427 424 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 PRTGQ2VWP7 1150 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 FAM71E1Q6IPT2 247 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 TNFAIP8L2Q6P589 184 aaPredicted RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SAMD14Q8IZD0 417 aaPredicted RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 ADGRG5Q8IZF4 528 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 OR4N4Q8N0Y3 316 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 DHRSXQ8N5I4 330 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 PPCDCQ96CD2 204 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 KLHL31Q9H511 634 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 SYNDIG1Q9H7V2 258 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 LYRM4Q9HD34 91 aa9.21□□□□□ -0.94
CLDN18-202ENST00000343735 FAM32AQ9Y421 112 aaKnown RBP9.21□□□□□ -0.94
CLDN18-202ENST00000343735 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SMIM30A4D0T7 59 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 FITM1A5D6W6 292 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 CD59P13987 128 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DDCP20711 480 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 CSF2RBP32927 897 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 BUD31P41223 144 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 AVPR1BP47901 424 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 CFHR1Q03591 330 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SLAMF1Q13291 335 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SNAP47Q5SQN1 464 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 PRR23CQ6ZRP0 262 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 CCDC80Q76M96 950 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 MICU2Q8IYU8 434 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DPP10Q8N608 796 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 KCT2Q8NC54 265 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 COL26A1Q96A83 441 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 COQ8BQ96D53 544 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DNAJA3Q96EY1 480 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 FCRL4Q96PJ5 515 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SH3GL1Q99961 368 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 NUDT22Q9BRQ3 303 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 ZNF717Q9BY31 904 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 EQTNQ9NQ60 294 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SLC25A37Q9NYZ2 338 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 FBXO9Q9UK97 447 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 BAG5Q9UL15 447 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 MYRFQ9Y2G1 1151 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 A0A1W2PQM1 296 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 C1orf226A1L170 272 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 H3BNH8 94 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 HYAL3O43820 417 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 CBFA2T3O75081 653 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 APOL3O95236 402 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SLC7A1P30825 629 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 IDH2P48735 452 aaKnown RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 RAB8AP61006 207 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DNASE1L3Q13609 305 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SPATS1Q496A3 300 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 SHISA5Q8N114 240 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 ATG16L2Q8NAA4 619 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
CLDN18-202ENST00000343735 OTULINQ96BN8 352 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 TM4SF18Q96CE8 201 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 MVB12AQ96EY5 273 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 DUSP26Q9BV47 211 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 NOX1Q9Y5S8 564 aa9.2□□□□□ -0.94
CLDN18-202ENST00000343735 HYKKA2RU49 373 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms